RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CYP2F1P24903 491 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 TARSP26639 723 aaKnown RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 SNRPFP62306 86 aaKnown RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 MYO1EQ12965 1108 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 NFE2Q16621 373 aaPredicted RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 KMT5BQ4FZB7 885 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 ASCL5Q7RTU5 278 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 LIMS2Q7Z4I7 341 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 ARID3BQ8IVW6 561 aaPredicted RBP18.42■□□□□ 0.54
HMGN3-203ENST00000620514 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 LRRC3BQ96PB8 259 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 CGRRF1Q99675 332 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 COL4A2P08572 1712 aa18.42■□□□□ 0.54
HMGN3-203ENST00000620514 MIA3Q5JRA6 1907 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 MYBPHLA2RUH7 354 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ZNF263O14978 683 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ATP2C2O75185 946 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 FGF19O95750 216 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 HMGA1P17096 107 aaKnown RBP18.41■□□□□ 0.54
HMGN3-203ENST00000620514 LHX1P48742 406 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 TAF12Q16514 161 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 DDR2Q16832 855 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ARHGAP15Q53QZ3 475 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 C12orf56Q8IXR9 622 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 PLEKHO2Q8TD55 490 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ZNF516Q92618 1163 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 IRF7Q92985 503 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 FNBP1Q96RU3 617 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ZFHX2Q9C0A1 2572 aaPredicted RBP18.41■□□□□ 0.54
HMGN3-203ENST00000620514 ARNTLO00327 626 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 EXOC3O60645 756 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 PRAMEF12O95522 483 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 PRR29P0C7W0 189 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 LMO2P25791 158 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 CDC25CP30307 473 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 CASP4P49662 377 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 NDUFA8P51970 172 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 ZNF852Q6ZMS4 543 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 TMEM150AQ86TG1 271 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 C1orf210Q8IVY1 113 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 SPATA18Q8TC71 538 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 E2F7Q96AV8 911 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 BCO2Q9BYV7 579 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 OSBPL6Q9BZF3 934 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 SMG9Q9H0W8 520 aaKnown RBP18.4■□□□□ 0.54
HMGN3-203ENST00000620514 TASP1Q9H6P5 420 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 CGNQ9P2M7 1197 aaKnown RBP18.4■□□□□ 0.54
HMGN3-203ENST00000620514 USP25Q9UHP3 1055 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 TICRRQ7Z2Z1 1910 aa18.4■□□□□ 0.54
HMGN3-203ENST00000620514 FAM237AA0A1B0GTK4 181 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 PRR23AA6NEV1 266 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 F11P03951 625 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 PCSK1P29120 753 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 SYKP43405 635 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 NLRP12P59046 1061 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 FZD5Q13467 585 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 FAM171BQ6P995 826 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 DPH6Q7L8W6 267 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 YAF2Q8IY57 180 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 MAML2Q8IZL2 1156 aaPredicted RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 GCNAQ96QF7 691 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 MMS19Q96T76 1030 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 SYT15Q9BQS2 421 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 MRPL45Q9BRJ2 306 aaKnown RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 SLC46A2Q9BY10 475 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 GOLPH3LQ9H4A5 285 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 ABCB6Q9NP58 842 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 TRPV5Q9NQA5 729 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 SPATA6Q9NWH7 488 aaPredicted RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 NDRG2Q9UN36 371 aaKnown RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 MAGED2Q9UNF1 606 aaPredicted RBP18.39■□□□□ 0.53
HMGN3-203ENST00000620514 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 PIAS3Q9Y6X2 628 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 R4GN57 208 aa18.39■□□□□ 0.53
HMGN3-203ENST00000620514 CACNA1IQ9P0X4 2223 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 NUP210Q8TEM1 1887 aaPredicted RBP18.38■□□□□ 0.53
HMGN3-203ENST00000620514 DPYSL4O14531 572 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 PDGFRBP09619 1106 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 SP9P0CG40 484 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 WARSP23381 471 aaKnown RBP18.38■□□□□ 0.53
HMGN3-203ENST00000620514 RPL10AP62906 217 aaKnown RBP18.38■□□□□ 0.53
HMGN3-203ENST00000620514 FCHO2Q0JRZ9 810 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 PSMD2Q13200 908 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 SPATA2LQ8IUW3 424 aaPredicted RBP18.38■□□□□ 0.53
HMGN3-203ENST00000620514 ZNF687Q8N1G0 1237 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 FSIP1Q8NA03 581 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 CLDN23Q96B33 292 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 ZFYVE19Q96K21 471 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 NELL2Q99435 816 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 KCTD10Q9H3F6 313 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 CRTAC1Q9NQ79 661 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 DMAC2Q9NW81 257 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 CDH9Q9ULB4 789 aa18.38■□□□□ 0.53
HMGN3-203ENST00000620514 F5P12259 2224 aa18.37■□□□□ 0.53
HMGN3-203ENST00000620514 USP34Q70CQ2 3546 aa18.37■□□□□ 0.53
HMGN3-203ENST00000620514 MYO15AQ9UKN7 3530 aa18.37■□□□□ 0.53
HMGN3-203ENST00000620514 SLC38A8A6NNN8 435 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms