RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SLC27A5Q9Y2P5 690 aa23.75■■□□□ 1.39
SRRT-218ENST00000620394 MYBPHLA2RUH7 354 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 SPECC1L-ADORA2AF8WAN1 911 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 EXTL3O43909 919 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 GDF9O60383 454 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 FGF19O95750 216 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 ATF6P18850 670 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 HOXA6P31267 233 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 CTHP32929 405 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 LIMK1P53667 647 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 SLC39A12Q504Y0 691 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 HEATR6Q6AI08 1181 aaKnown RBP23.74■■□□□ 1.39
SRRT-218ENST00000620394 CNNM4Q6P4Q7 775 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 GAREM2Q75VX8 874 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 DNAJB7Q7Z6W7 309 aaPredicted RBP23.74■■□□□ 1.39
SRRT-218ENST00000620394 ITIH5Q86UX2 942 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 CCDC65Q8IXS2 484 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 SYCP3Q8IZU3 236 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 C1orf127Q8N9H9 656 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 RSPRY1Q96DX4 576 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 TRIM9Q9C026 710 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 ANGPTL2Q9UKU9 493 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 SPAG17Q6Q759 2223 aa23.74■■□□□ 1.39
SRRT-218ENST00000620394 KIAA0391O15091 583 aaKnown RBP23.73■■□□□ 1.39
SRRT-218ENST00000620394 SOAT2O75908 522 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 KCNA4P22459 653 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 SOX9P48436 509 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 TUFMP49411 452 aaKnown RBP23.73■■□□□ 1.39
SRRT-218ENST00000620394 TFAMQ00059 246 aaKnown RBP23.73■■□□□ 1.39
SRRT-218ENST00000620394 THEM5Q8N1Q8 247 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 LRRC52Q8N7C0 313 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 SPPL2BQ8TCT7 592 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 LRRC27Q9C0I9 530 aa23.73■■□□□ 1.39
SRRT-218ENST00000620394 PRPF6O94906 941 aaKnown RBP23.72■■□□□ 1.39
SRRT-218ENST00000620394 ITGB3P05106 788 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 PDIA4P13667 645 aaKnown RBP23.72■■□□□ 1.39
SRRT-218ENST00000620394 POLR2BP30876 1174 aaKnown RBP23.72■■□□□ 1.39
SRRT-218ENST00000620394 AASDHQ4L235 1098 aaPredicted RBP23.72■■□□□ 1.39
SRRT-218ENST00000620394 ARHGAP29Q52LW3 1261 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 WDR44Q5JSH3 913 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 STXBP5Q5T5C0 1151 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 LRRTM3Q86VH5 581 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 WDR5BQ86VZ2 330 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 SYNPOQ8N3V7 929 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 ITGA11Q9UKX5 1188 aa23.72■■□□□ 1.39
SRRT-218ENST00000620394 EIF3DO15371 548 aaKnown RBP eCLIP23.71■■□□□ 1.39
SRRT-218ENST00000620394 CUTAO60888 179 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 WEE1P30291 646 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 CCINQ13939 588 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 TXNDC11Q6PKC3 985 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 SHC4Q6S5L8 630 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 STXBP4Q6ZWJ1 553 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 GPD1LQ8N335 351 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 C12orf50Q8NA57 414 aaPredicted RBP23.71■■□□□ 1.39
SRRT-218ENST00000620394 GLIS3Q8NEA6 775 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 SPATA18Q8TC71 538 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 CACTINQ8WUQ7 758 aaKnown RBP23.71■■□□□ 1.39
SRRT-218ENST00000620394 LEO1Q8WVC0 666 aaPredicted RBP23.71■■□□□ 1.39
SRRT-218ENST00000620394 SEPT5Q99719 369 aaPredicted RBP23.71■■□□□ 1.39
SRRT-218ENST00000620394 LPIN3Q9BQK8 851 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 IL21Q9HBE4 155 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 OBP2AQ9NY56 170 aa23.71■■□□□ 1.39
SRRT-218ENST00000620394 TFIP11Q9UBB9 837 aaKnown RBP23.71■■□□□ 1.39
SRRT-218ENST00000620394 GOLGA8IPA6NC78 632 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 GOLGA8JA6NMD2 632 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 DPYSL4O14531 572 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 HAPLN1P10915 354 aaPredicted RBP23.7■■□□□ 1.38
SRRT-218ENST00000620394 GABRR2P28476 465 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 PMLP29590 882 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 VEPH1Q14D04 833 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 MGAT5BQ3V5L5 792 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 ARID3BQ8IVW6 561 aaPredicted RBP23.7■■□□□ 1.38
SRRT-218ENST00000620394 DCP1BQ8IZD4 617 aaKnown RBP23.7■■□□□ 1.38
SRRT-218ENST00000620394 PDCL2Q8N4E4 241 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 LOXL4Q96JB6 756 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 MAGEF1Q9HAY2 307 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 GDAP2Q9NXN4 497 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 SIX4Q9UIU6 781 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 L1RE1Q9UN81 338 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 AGAP1Q9UPQ3 857 aa23.7■■□□□ 1.38
SRRT-218ENST00000620394 HOXD13P35453 343 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 PLCB2Q00722 1185 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 AMPD3Q01432 767 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 EHHADHQ08426 723 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 PON2Q15165 354 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 EPM2AIP1Q7L775 607 aaPredicted RBP23.69■■□□□ 1.38
SRRT-218ENST00000620394 TMEM86AQ8N2M4 240 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 IQUBQ8NA54 791 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 DHX58Q96C10 678 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 MTMR12Q9C0I1 747 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 ATXN3LQ9H3M9 355 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 PCIF1Q9H4Z3 704 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 PDE11AQ9HCR9 933 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 GTSE1Q9NYZ3 720 aa23.69■■□□□ 1.38
SRRT-218ENST00000620394 UBE4BO95155 1302 aa23.68■■□□□ 1.38
SRRT-218ENST00000620394 CNOT1A5YKK6 2376 aaKnown RBP23.68■■□□□ 1.38
SRRT-218ENST00000620394 F13A1P00488 732 aa23.68■■□□□ 1.38
SRRT-218ENST00000620394 ZSCAN22P10073 491 aaPredicted RBP23.68■■□□□ 1.38
SRRT-218ENST00000620394 CDC25CP30307 473 aa23.68■■□□□ 1.38
SRRT-218ENST00000620394 SHC2P98077 582 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms