RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	BBS9	Q3SYG4	887 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	WASHC2D	Q5SRD0	308 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	LVRN	Q6Q4G3	990 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	KATNAL2	Q8IYT4	538 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	SYNC	Q9H7C4	482 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	WDR35	Q9P2L0	1181 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	PCSK1N	Q9UHG2	260 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	IP6K2	Q9UHH9	426 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	STARD13	Q9Y3M8	1113 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	DNALI1	O14645	258 aa	Predicted RBP	15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	PLA2G6	O60733	806 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	CYP1A1	P04798	512 aa	Predicted RBP	15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	LMNB2	Q03252	620 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	SLC1A5	Q15758	541 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	MTHFD1L	Q6UB35	978 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	CENPU	Q71F23	418 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	TRABD2A	Q86V40	505 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	CDR2L	Q86X02	465 aa	Predicted RBP	15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	ZNF677	Q86XU0	584 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	PYROXD1	Q8WU10	500 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	ZFAND2B	Q8WV99	257 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	NMRK1	Q9NWW6	199 aa		15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	NXF1	Q9UBU9	619 aa	Known RBP	15.22	■□□□□ 0.03
SMTN-223	ENST00000619644	PDCD2	Q16342	344 aa	Predicted RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	RHPN2	Q8IUC4	686 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	RBM41	Q96IZ5	413 aa	Known RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	SLITRK1	Q96PX8	696 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	LGALS13	Q9UHV8	139 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644		A0A0G2JND7	137 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	NVL	O15381	856 aa	Known RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	C4BPA	P04003	597 aa	Known RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	HSPA1L	P34931	641 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	TFAM	Q00059	246 aa	Known RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	MOGS	Q13724	837 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	PRKG1	Q13976	671 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	TFDP1	Q14186	410 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	SAMD3	Q8N6K7	520 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	FAM136A	Q96C01	138 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	VCX	Q9H320	206 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	UBN1	Q9NPG3	1134 aa		15.21	■□□□□ 0.03
SMTN-223	ENST00000619644	CST3	P01034	146 aa	Predicted RBP	15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	KRT19	P08727	400 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	KLRC2	P26717	231 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	NRL	P54845	237 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	BASP1	P80723	227 aa	Known RBP	15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	EEPD1	Q7L9B9	569 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	PALM2	Q8IXS6	379 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	NIM1K	Q8IY84	436 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	RCOR2	Q8IZ40	523 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	PHC3	Q8NDX5	983 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	FLAD1	Q8NFF5	587 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	RSAD2	Q8WXG1	361 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	MAML1	Q92585	1016 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNF333	Q96JL9	665 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	TRIM4	Q9C037	500 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	GINM1	Q9NU53	330 aa		15.21	■□□□□ 0.02
SMTN-223	ENST00000619644	KAT6A	Q92794	2004 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	ZC3H11A	O75152	810 aa	Known RBP eCLIP	15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	DCTN3	O75935	186 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	SRGAP2C	P0DJJ0	459 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	TNFSF9	P41273	254 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	ERF	P50548	548 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	PSMD6	Q15008	389 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	HIF1A	Q16665	826 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	OR52E8	Q6IFG1	317 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	GPAT2	Q6NUI2	795 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	IRGC	Q6NXR0	463 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	SPOCD1	Q6ZMY3	1216 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	VSIG10L	Q86VR7	867 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	SLC7A3	Q8WY07	619 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	MTMR12	Q9C0I1	747 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	HAPLN2	Q9GZV7	340 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	GRID1	Q9ULK0	1009 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	COL11A2	P13942	1736 aa	Predicted RBP	15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	VWA5A	O00534	786 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	TCEA3	O75764	348 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	EGFR	P00533	1210 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	POLE2	P56282	527 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	ZBTB16	Q05516	673 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	TRPC3	Q13507	836 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	FAM43B	Q6ZT52	329 aa	Predicted RBP	15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	LPAR1	Q92633	364 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	NTPCR	Q9BSD7	190 aa	Known RBP	15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	ZCWPW1	Q9H0M4	648 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	DCLRE1B	Q9H816	532 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	IRAK4	Q9NWZ3	460 aa		15.2	■□□□□ 0.02
SMTN-223	ENST00000619644	PIK3R2	O00459	728 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ACO1	P21399	889 aa	Known RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ADRA1D	P25100	572 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	PSMA2	P25787	234 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	RASSF2	P50749	326 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	HMGCS2	P54868	508 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	EAPP	Q56P03	285 aa	Predicted RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	C3orf62	Q6ZUJ4	267 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	EMC1	Q8N766	993 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	NSUN6	Q8TEA1	469 aa	Known RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	FBXO41	Q8TF61	875 aa		15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	MAK16	Q9BXY0	300 aa	Known RBP	15.19	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNFX1	Q9P2E3	1918 aa	Known RBP	15.19	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms