RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
TP53-223ENST00000618944 PPP1R2P3Q6NXS1 205 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 MPZL3Q6UWV2 235 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 ZBED8Q8IZ13 594 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 ARFGAP1Q8N6T3 406 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 CKAP2Q8WWK9 683 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 TCP11Q8WWU5 503 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 PDGFCQ9NRA1 345 aa11.81□□□□□ -0.52
TP53-223ENST00000618944 PIK3R2O00459 728 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 GRM1Q13255 1194 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 LRRC38Q5VT99 294 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 CYB5D1Q6P9G0 228 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 THOC1Q96FV9 657 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 FAM167AQ96KS9 214 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 TGS1Q96RS0 853 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 NKIRAS1Q9NYS0 192 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
TP53-223ENST00000618944 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 ACKR2O00590 384 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 CST8O60676 142 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 CNMDO75829 334 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 DDNO94850 711 aaPredicted RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 NFICP08651 508 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 GHRP10912 638 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 IBSPP21815 317 aaPredicted RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 GCAP28676 217 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 GDF10P55107 478 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 PDIA2Q13087 525 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 TAF5Q15542 800 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 TSHZ1Q6ZSZ6 1077 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 GPATCH11Q8N954 259 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 CFAP57Q96MR6 1250 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 ZNF518BQ9C0D4 1074 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 SDCBP2Q9H190 292 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
TP53-223ENST00000618944 PTPRHQ9HD43 1115 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 LTBP3Q9NS15 1303 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 HMGXB4Q9UGU5 601 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 LGALS13Q9UHV8 139 aa11.8□□□□□ -0.52
TP53-223ENST00000618944 C3orf70A6NLC5 250 aaPredicted RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 GPR25O00155 361 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 LRCH4O75427 683 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 ITGB3P05106 788 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 FOXN2P32314 431 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 NRLP54845 237 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 OTUD4Q01804 1114 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 GJC2Q5T442 439 aaPredicted RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 FAM47EQ6ZV65 393 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 RELL1Q8IUW5 271 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 MAML1Q92585 1016 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 P3H4Q92791 437 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 TWNKQ96RR1 684 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 METTL5Q9NRN9 209 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 DDX56Q9NY93 547 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 SIX4Q9UIU6 781 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 DRG1Q9Y295 367 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 PPP2R3BQ9Y5P8 575 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 IGKV6-21A0A0C4DH24 114 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 SIGLEC16A6NMB1 481 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 LACTBL1A8MY62 500 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 UBOX5O94941 541 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 ERBB2P04626 1255 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 KRT15P19012 456 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 PROZP22891 400 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 RAD23BP54727 409 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 SURF1Q15526 300 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 ZNF667Q5HYK9 610 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 SYCP2LQ5T4T6 812 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 RNASEH2BQ5TBB1 312 aaKnown RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 TBC1D1Q86TI0 1168 aaPredicted RBP11.79□□□□□ -0.52
TP53-223ENST00000618944 C4orf33Q8N1A6 199 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 C1orf127Q8N9H9 656 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 ACTL9Q8TC94 416 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 CCHCR1Q8TD31 782 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 HSPH1Q92598 858 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 FGD4Q96M96 766 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 MAF1Q9H063 256 aa11.79□□□□□ -0.52
TP53-223ENST00000618944 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms