RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RNF146Q9NTX7 359 aa21.46■■□□□ 1.03
NEK3-208ENST00000618534 EIF4E1BA6NMX2 242 aaKnown RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 CTCFP49711 727 aaPredicted RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 GDF10P55107 478 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 OVGP1Q12889 678 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 MTM1Q13496 603 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 FYB2Q5VWT5 728 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 TRIM68Q6AZZ1 485 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 PYROXD1Q8WU10 500 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 WDR83Q9BRX9 315 aaKnown RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 KANSL3Q9P2N6 904 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 DCTN4Q9UJW0 460 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 CNTNAP2Q9UHC6 1331 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 LRRIQ4A6NIV6 560 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 H0Y3Z8 333 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 TRAFD1O14545 582 aaPredicted RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 LUC7L3O95232 432 aaKnown RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 EDN1P05305 212 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 ACTR2P61160 394 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 TAB3Q8N5C8 712 aaPredicted RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 RFWD2Q8NHY2 731 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 ANKRD27Q96NW4 1050 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 PAFAH2Q99487 392 aa21.45■■□□□ 1.02
NEK3-208ENST00000618534 KLF6Q99612 283 aaPredicted RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 DENND2DQ9H6A0 471 aaPredicted RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 SSU72Q9NP77 194 aaKnown RBP21.45■■□□□ 1.02
NEK3-208ENST00000618534 GOLGA8RI6L899 631 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 HARSP12081 509 aaKnown RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 CTC1Q2NKJ3 1217 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ZNF394Q53GI3 561 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 CLNKQ7Z7G1 428 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ZNF276Q8N554 614 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 UBR7Q8N806 425 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ATP11CQ8NB49 1132 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 FLAD1Q8NFF5 587 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 CPT1BQ92523 772 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 RPAP3Q9H6T3 665 aaPredicted RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 SLC9A2Q9UBY0 812 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 FBXO40Q9UH90 709 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ZNRF3Q9ULT6 936 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 LRRC42Q9Y546 428 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 LIN7AO14910 233 aaPredicted RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 ENTPD5O75356 428 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 PTPN4P29074 926 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 SPDYAQ5MJ70 313 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 WASHC2DQ5SRD0 308 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 PPP1R15BQ5SWA1 713 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 CYP4A22Q5TCH4 519 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 CAPRIN2Q6IMN6 1127 aaKnown RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 XRRA1Q6P2D8 792 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 RHPN2Q8IUC4 686 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ENDOVQ8N8Q3 282 aaKnown RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 TCP10LQ8TDR4 215 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 MZB1Q8WU39 189 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 ATG4CQ96DT6 458 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 DDX56Q9NY93 547 aaKnown RBP21.44■■□□□ 1.02
NEK3-208ENST00000618534 SLC17A7Q9P2U7 560 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 COL4A5P29400 1685 aa21.44■■□□□ 1.02
NEK3-208ENST00000618534 FER1L6Q2WGJ9 1857 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 K7ERI5 159 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ABCD1P33897 745 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 PHBP35232 272 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ARL4CP56559 192 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 MTMR2Q13614 643 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 SEPT7Q16181 437 aaKnown RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 ADGRD1Q6QNK2 874 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 PPIL6Q8IXY8 311 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 DEPTORQ8TB45 409 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ACTL9Q8TC94 416 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 MIPEPQ99797 713 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 QTRT2Q9H974 415 aaKnown RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 SNCAIPQ9Y6H5 919 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 A0A0B4J269 797 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 CCDC189A1A4V9 331 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 C3orf70A6NLC5 250 aaPredicted RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 E7ENQ6 273 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 VWA5AO00534 786 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 NDC80O14777 642 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 CST3P01034 146 aaPredicted RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 PIGRP01833 764 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 TROVE2P10155 538 aaKnown RBP eCLIP21.43■■□□□ 1.02
NEK3-208ENST00000618534 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 OTUD4Q01804 1114 aaKnown RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 PIGHQ14442 188 aaPredicted RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 SMTNL2Q2TAL5 461 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 C3orf62Q6ZUJ4 267 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 FBXO36Q8NEA4 188 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 DHRS4Q9BTZ2 278 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ACSS3Q9H6R3 686 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 TLE6Q9H808 572 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 ALG13Q9NP73 1137 aaKnown RBP21.43■■□□□ 1.02
NEK3-208ENST00000618534 LNPEPQ9UIQ6 1025 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
NEK3-208ENST00000618534 MAFGO15525 162 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 XKR3Q5GH77 459 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 SLFN12LQ6IEE8 588 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 GPAT2Q6NUI2 795 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 PCGF5Q86SE9 256 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 NAT8LQ8N9F0 302 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms