RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
DDX1-207ENST00000617198 TMEM35BQ8NCS4 154 aa18.39■□□□□ 0.53
DDX1-207ENST00000617198 NAF1Q96HR8 494 aaKnown RBP18.39■□□□□ 0.53
DDX1-207ENST00000617198 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
DDX1-207ENST00000617198 NPHS2Q9NP85 383 aa18.39■□□□□ 0.53
DDX1-207ENST00000617198 MYH9P35579 1960 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 LRRIQ4A6NIV6 560 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 NEBLO76041 1014 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 TPBGLP0DKB5 382 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 GM2AP17900 193 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 NAMPTP43490 491 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 ARL4CP56559 192 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 RNASELQ05823 741 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 TFDP1Q14186 410 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 EFTUD2Q15029 972 aaKnown RBP eCLIP18.38■□□□□ 0.532e-7■■■■□ 24.5
DDX1-207ENST00000617198 SEPT7Q16181 437 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 MAPK6Q16659 721 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 WASHC2DQ5SRD0 308 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 PPP1R15BQ5SWA1 713 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 ADGRD1Q6QNK2 874 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 PPIL6Q8IXY8 311 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 ASAP3Q8TDY4 903 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 SAR1AQ9NR31 198 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 HNRNPCL1O60812 293 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 SMNDC1O75940 238 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX1-207ENST00000617198 TROVE2P10155 538 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX1-207ENST00000617198 ADRA1DP25100 572 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 CDC25CP30307 473 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 SSTR1P30872 391 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 MTMR2Q13614 643 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 ENDOVQ8N8Q3 282 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 ATG4CQ96DT6 458 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 DHRS4Q9BTZ2 278 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 ZNF518BQ9C0D4 1074 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 PORCNQ9H237 461 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 FBXO40Q9UH90 709 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 LNPEPQ9UIQ6 1025 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 RPL26L1Q9UNX3 145 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 LRRC42Q9Y546 428 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
DDX1-207ENST00000617198 GOLGB1Q14789 3259 aaKnown RBP18.38■□□□□ 0.53
DDX1-207ENST00000617198 PTPN4P29074 926 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 PSEN1P49768 467 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 RAD23BP54727 409 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 BLMHQ13867 455 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 KLHL38Q2WGJ6 581 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 FNBP1LQ5T0N5 605 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 SCARA3Q6AZY7 606 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 C3orf62Q6ZUJ4 267 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 NSUN6Q8TEA1 469 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 CPT1BQ92523 772 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 PAFAH2Q99487 392 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 TLE6Q9H808 572 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ZNRF3Q9ULT6 936 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 EFR3BQ9Y2G0 817 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 SIP14410 1827 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 C3orf70A6NLC5 250 aaPredicted RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 WNT10BO00744 389 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 TM9SF1O15321 606 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ASS1P00966 412 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 BRD2P25440 801 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 GAD2Q05329 585 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ANKRD22Q5VYY1 191 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 POLNQ7Z5Q5 900 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 CLNKQ7Z7G1 428 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 MTDHQ86UE4 582 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 RHPN2Q8IUC4 686 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ZNF276Q8N554 614 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 NAT8LQ8N9F0 302 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 TCP10LQ8TDR4 215 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 SH3TC2Q8TF17 1288 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ALKBH8Q96BT7 664 aaKnown RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 ACSS3Q9H6R3 686 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
DDX1-207ENST00000617198 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
DDX1-207ENST00000617198 WDR91A4D1P6 747 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 SKAP2O75563 359 aaPredicted RBP18.36■□□□□ 0.53
DDX1-207ENST00000617198 CST3P01034 146 aaPredicted RBP18.36■□□□□ 0.53
DDX1-207ENST00000617198 SUPT20HL2P0C7V6 817 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 DYNLT1P63172 113 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 OTUD4Q01804 1114 aaKnown RBP18.36■□□□□ 0.53
DDX1-207ENST00000617198 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 SUPT20HL1Q3ZLR7 823 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 MSS51Q4VC12 460 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 PLEKHG4Q58EX7 1191 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 MICAL1Q8TDZ2 1067 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 MZB1Q8WU39 189 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 SPDL1Q96EA4 605 aa18.36■□□□□ 0.53
DDX1-207ENST00000617198 SAE1Q9UBE0 346 aaPredicted RBP18.36■□□□□ 0.53
DDX1-207ENST00000617198 APBA3O96018 575 aa18.35■□□□□ 0.53
DDX1-207ENST00000617198 ABL2P42684 1182 aa18.35■□□□□ 0.53
DDX1-207ENST00000617198 GDF10P55107 478 aa18.35■□□□□ 0.53
DDX1-207ENST00000617198 SEZ6Q53EL9 994 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms