RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CENPCQ03188 943 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TCEAL1Q15170 157 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 MTHFD1LQ6UB35 978 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TRPM8Q7Z2W7 1104 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 WDR49Q8IV35 697 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 XPO6Q96QU8 1125 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 KATNBL1Q9H079 304 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 FZD8Q9H461 694 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 SLITRK6Q9H5Y7 841 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ERAP1Q9NZ08 941 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 UVRAGQ9P2Y5 699 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 NXF1Q9UBU9 619 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 SNX24Q9Y343 169 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 MIF4GDA9UHW6 222 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ACKR2O00590 384 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 HBP1O60381 514 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 KRT19P08727 400 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 RARAP10276 462 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 CCNA1P78396 465 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ANKS1BQ7Z6G8 1248 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ANKRD23Q86SG2 305 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 JAMLQ86YT9 394 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ABRAQ8N0Z2 381 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ATG4AQ8WYN0 398 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 CXCL16Q9H2A7 254 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ABCF3Q9NUQ8 709 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 AKT3Q9Y243 479 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 GINS2Q9Y248 185 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 C2CD2Q9Y426 696 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 PCDHA3Q9Y5H8 950 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ASB14A6NK59 587 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 TMEM191BP0C7N4 346 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 CDH8P55286 799 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 TAS2R40P59535 323 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 HTRA3P83110 453 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 ENPEPQ07075 957 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 SIX1Q15475 284 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 ERMARDQ5T6L9 678 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 TSHZ1Q6ZSZ6 1077 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF606Q8WXB4 792 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 GORASP1Q9BQQ3 440 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 IMPG2Q9BZV3 1241 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 XYLT2Q9H1B5 865 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 ADAM22Q9P0K1 906 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 HMGXB4Q9UGU5 601 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 DIS3Q9Y2L1 958 aaKnown RBP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 UBOX5O94941 541 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 PDHA1P08559 390 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 ASPAP45381 313 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTP4A2Q12974 167 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 KRT71Q3SY84 523 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 NUGGCQ68CJ6 796 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 GPR142Q7Z601 462 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 UBR7Q8N806 425 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 FAM81AQ8TBF8 368 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 C1orf54Q8WWF1 131 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
PCDHGA9-202ENST00000616887 GOLGA6L10A0A0M3HER8 536 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 PHF2O75151 1096 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 PPFIA2O75334 1257 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 KRT16P08779 473 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 SMPD1P17405 629 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTGIRP43119 386 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF132P52740 706 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 NCALDP61601 193 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 MAMLD1Q13495 774 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 AMHR2Q16671 573 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 DUOXA2Q1HG44 320 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF699Q32M78 642 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 CYP4A22Q5TCH4 519 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 AGBL2Q5U5Z8 902 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ANO7Q6IWH7 933 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF317Q96PQ6 595 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 FAM129AQ9BZQ8 928 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms