RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 KRT13P13646 458 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 AVPR2P30518 371 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 PSMC2P35998 433 aaKnown RBP23.72■■□□□ 1.39
CBWD3-212ENST00000616550 PRCPP42785 496 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 VAMP7P51809 220 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 GPC5P78333 572 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 NCOA4Q13772 614 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 MAPRE1Q15691 268 aaKnown RBP23.72■■□□□ 1.39
CBWD3-212ENST00000616550 ZNF699Q32M78 642 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 EDRF1Q3B7T1 1238 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 FAM78AQ5JUQ0 283 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 TANGO2Q6ICL3 276 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 POTEHQ6S545 545 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 INTS8Q75QN2 995 aaKnown RBP23.72■■□□□ 1.39
CBWD3-212ENST00000616550 FAM186BQ8IYM0 893 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 OR6B3Q8NGW1 331 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 SPATA20Q8TB22 786 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 SHKBP1Q8TBC3 707 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 GPR152Q8TDT2 470 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 ZSWIM3Q96MP5 696 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 PKMYT1Q99640 499 aa23.72■■□□□ 1.39
CBWD3-212ENST00000616550 ZNF334Q9HCZ1 680 aaPredicted RBP23.72■■□□□ 1.39
CBWD3-212ENST00000616550 ZNF318Q5VUA4 2279 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 MYBPHLA2RUH7 354 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 NRG2O14511 850 aaPredicted RBP23.71■■□□□ 1.39
CBWD3-212ENST00000616550 AKAP3O75969 853 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 CYP2F1P24903 491 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 GABRR2P28476 465 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 RPL10AP62906 217 aaKnown RBP23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ZACNQ401N2 412 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ZCWPW2Q504Y3 356 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ZNF667Q5HYK9 610 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 FAM171BQ6P995 826 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 C4orf50Q6ZRC1 276 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 SMARCD2Q92925 531 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ELSPBP1Q96BH3 223 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 FUBP3Q96I24 572 aaKnown RBP eCLIP23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ASB16Q96NS5 453 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 MRPL45Q9BRJ2 306 aaKnown RBP23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ATXN3LQ9H3M9 355 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 VRTNQ9H8Y1 702 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 CA14Q9ULX7 337 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 ZDBF2Q9HCK1 2354 aa23.71■■□□□ 1.39
CBWD3-212ENST00000616550 STK25O00506 426 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 ATP2C2O75185 946 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 GADD45BO75293 160 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 VCPP55072 806 aaKnown RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 PSMC1P62191 440 aaKnown RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 SGSM1Q2NKQ1 1148 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 ARHGAP15Q53QZ3 475 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 COBLL1Q53SF7 1204 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 ASTLQ6HA08 431 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 GAREM2Q75VX8 874 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 FLCNQ8NFG4 579 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 ZSCAN18Q8TBC5 510 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 GCNAQ96QF7 691 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 TSG101Q99816 390 aa23.7■■□□□ 1.38
CBWD3-212ENST00000616550 MAGEC2Q9UBF1 373 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-212ENST00000616550 VNN1O95497 513 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 RFX1P22670 979 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 CDC25CP30307 473 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 CLCN5P51795 746 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 PFKPQ01813 784 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 ENPEPQ07075 957 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 CFAP221Q4G0U5 840 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 SV2AQ7L0J3 742 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 PRRX2Q99811 253 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 PLA2G2FQ9BZM2 168 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 CRTAC1Q9NQ79 661 aa23.69■■□□□ 1.38
CBWD3-212ENST00000616550 KRBA1A5PL33 1030 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 CETN3O15182 167 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 CSH1P0DML2 217 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 CSH2P0DML3 217 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 P4HA1P13674 534 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 GPR15P49685 360 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 STIM1Q13586 685 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 DDR2Q16832 855 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 CCDC142Q17RM4 750 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 C1orf220Q5T0J3 134 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 SCN4BQ8IWT1 228 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 ARHGEF3Q9NR81 526 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 KMT2EQ8IZD2 1858 aa23.68■■□□□ 1.38
CBWD3-212ENST00000616550 A8MXQ7 604 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 EPB41P11171 864 aaKnown RBP23.67■■□□□ 1.38
CBWD3-212ENST00000616550 NPR3P17342 541 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 FCARP24071 287 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 PIK3CAP42336 1068 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 MAGEA11P43364 429 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 CYP27A1Q02318 531 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 GPR158Q5T848 1215 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 IER5LQ5T953 404 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 SDHAF4Q5VUM1 108 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 ISM2Q6H9L7 571 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 MYCBPAPQ8TBZ2 947 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 TAF4BQ92750 862 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 MYLPFQ96A32 169 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 E2F7Q96AV8 911 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 MKNK1Q9BUB5 465 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 TRPV4Q9HBA0 871 aa23.67■■□□□ 1.38
CBWD3-212ENST00000616550 MAGED2Q9UNF1 606 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms