RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OR1D2P34982 312 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 ARPP19P56211 112 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 GSDMDP57764 484 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 PSMC1P62191 440 aaKnown RBP15.63■□□□□ 0.09
CD48-203ENST00000613788 CAMK1Q14012 370 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 ARID5BQ14865 1188 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 STILQ15468 1287 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 NFE2Q16621 373 aaPredicted RBP15.63■□□□□ 0.09
CD48-203ENST00000613788 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 PLPP4Q5VZY2 271 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 FAM171BQ6P995 826 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 IRF2BP2Q7Z5L9 587 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 MYCBPAPQ8TBZ2 947 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 CLSTN3Q9BQT9 956 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 BZW2Q9Y6E2 419 aaKnown RBP15.63■□□□□ 0.09
CD48-203ENST00000613788 MYBPHLA2RUH7 354 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 C2orf71A6NGG8 1288 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 CYP11B1P15538 503 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 NDUFV1P49821 464 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 PDE6CP51160 858 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 GPR17Q13304 367 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 SLC39A12Q504Y0 691 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 MDH1BQ5I0G3 518 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
CD48-203ENST00000613788 C4orf50Q6ZRC1 276 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 SLC47A2Q86VL8 602 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 C12orf29Q8N999 325 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 GDPD5Q8WTR4 605 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 CYFIP2Q96F07 1278 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 TMEM209Q96SK2 561 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 CRTAC1Q9NQ79 661 aa15.63■□□□□ 0.09
CD48-203ENST00000613788 EPOPA6NHQ4 379 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 TEX28O15482 410 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 THAP12O43422 761 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 CSPG5O95196 566 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 SERPING1P05155 500 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 ADH1AP07327 375 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 CNPP09543 421 aaKnown RBP15.62■□□□□ 0.09
CD48-203ENST00000613788 OR4Q2P0C623 313 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 RPL17P18621 184 aaKnown RBP15.62■□□□□ 0.09
CD48-203ENST00000613788 PRKCIP41743 596 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 KLHL30Q0D2K2 578 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 RAB33AQ14088 237 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 CNGA2Q16280 664 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 TPGS2Q68CL5 300 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 ARHGAP17Q68EM7 881 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 LRRTM3Q86VH5 581 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 SPATA2LQ8IUW3 424 aaPredicted RBP15.62■□□□□ 0.09
CD48-203ENST00000613788 ZNF461Q8TAF7 563 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 C2orf15Q8WU43 125 aaKnown RBP15.62■□□□□ 0.09
CD48-203ENST00000613788 ZNF606Q8WXB4 792 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 PDLIM2Q96JY6 352 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 KLHL5Q96PQ7 755 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 PANX2Q96RD6 677 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 PKMYT1Q99640 499 aa15.62■□□□□ 0.09
CD48-203ENST00000613788 LAMA3Q16787 3333 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 PLXNA4Q9HCM2 1894 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 VWA8A3KMH1 1905 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 RFXAPO00287 272 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 ADAM12O43184 909 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 KLRC2P26717 231 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 IRS1P35568 1242 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 ROR1Q01973 937 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 CYP27A1Q02318 531 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 GOLGA8FQ08AF8 430 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 GOLGA8DPQ0D2H9 430 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 PPP1R26Q5T8A7 1209 aaPredicted RBP15.61■□□□□ 0.09
CD48-203ENST00000613788 ZNF697Q5TEC3 545 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 CCDC186Q7Z3E2 898 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 GLYCTKQ8IVS8 523 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 EPS8L1Q8TE68 723 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 TFAP2BQ92481 460 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 MRPL38Q96DV4 380 aaKnown RBP15.61■□□□□ 0.09
CD48-203ENST00000613788 PCED1BQ96HM7 432 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 FUBP3Q96I24 572 aaKnown RBP eCLIP15.61■□□□□ 0.09
CD48-203ENST00000613788 HNRNPABQ99729 332 aaKnown RBP15.61■□□□□ 0.09
CD48-203ENST00000613788 LPIN3Q9BQK8 851 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 MED10Q9BTT4 135 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 PDCL3Q9H2J4 239 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 ACP6Q9NPH0 428 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 FAM49BQ9NUQ9 324 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 HESX1Q9UBX0 185 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 MAFFQ9ULX9 164 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 PCDHB5Q9Y5E4 795 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 ATP8B3O60423 1300 aa15.61■□□□□ 0.09
CD48-203ENST00000613788 TSC2P49815 1807 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 HIDE1A8MVS5 230 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 O00370 1275 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 ABLIM3O94929 683 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 C1RP00736 705 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 BRD2P25440 801 aaKnown RBP15.6■□□□□ 0.09
CD48-203ENST00000613788 CCDC173Q0VFZ6 552 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 TDRD12Q587J7 1177 aaKnown RBP15.6■□□□□ 0.09
CD48-203ENST00000613788 E4F1Q66K89 784 aaPredicted RBP15.6■□□□□ 0.09
CD48-203ENST00000613788 LCLAT1Q6UWP7 414 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 GPIHBP1Q8IV16 184 aa15.6■□□□□ 0.09
CD48-203ENST00000613788 SPPL2BQ8TCT7 592 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms