RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RPGRIP1Q96KN7 1286 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF560Q96MR9 790 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 PPP1R10Q96QC0 940 aaKnown RBP9.47□□□□□ -0.89
CCDC47-207ENST00000612558 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 ZSWIM1Q9BR11 485 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 NUP85Q9BW27 656 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 ABCB6Q9NP58 842 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 RNF19AQ9NV58 838 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 RNF14Q9UBS8 474 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 CNOT8Q9UFF9 292 aaKnown RBP9.47□□□□□ -0.89
CCDC47-207ENST00000612558 AMFRQ9UKV5 643 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 STXBP5LQ9Y2K9 1186 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 CES2O00748 559 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 PTGESO14684 152 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 PPEF2O14830 753 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF185O15231 689 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 MGEA5O60502 916 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 KIF4AO95239 1232 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 VDRP11473 427 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 CD19P15391 556 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 LRPAP1P30533 357 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 NDST1P52848 882 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 C11orf63Q6NUN7 778 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 MON1BQ7L1V2 547 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 RSRC2Q7L4I2 434 aaKnown RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 CREG2Q8IUH2 290 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF564Q8TBZ8 553 aaPredicted RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 CAGE1Q8TC20 777 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 COG1Q8WTW3 980 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 TSC1Q92574 1164 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 GOLGA1Q92805 767 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 PGBD4Q96DM1 585 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 PBKQ96KB5 322 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 CAPZA3Q96KX2 299 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 HEXIM2Q96MH2 286 aaKnown RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ZFP42Q96MM3 310 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 DEFB118Q96PH6 123 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 RPS6KC1Q96S38 1066 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ADAM2Q99965 735 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 OSBPL7Q9BZF2 842 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 LHX5Q9H2C1 402 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 GOLPH3Q9H4A6 298 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 GDAP2Q9NXN4 497 aa9.46□□□□□ -0.89
CCDC47-207ENST00000612558 PACSIN2Q9UNF0 486 aaPredicted RBP9.46□□□□□ -0.89
CCDC47-207ENST00000612558 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 KPNA7A9QM74 516 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 TFRCP02786 760 aaKnown RBP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 CALB1P05937 261 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 THP07101 528 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 CD46P15529 392 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 HSPA6P17066 643 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 MMP8P22894 467 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 RRM1P23921 792 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 CXCR5P32302 372 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 MLH1P40692 756 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 PAFAH1B1P43034 410 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 TAF6P49848 677 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 NAA30Q147X3 362 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 MTFR1Q15390 333 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 CNGA2Q16280 664 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 ERCC6LQ2NKX8 1250 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 SV2CQ496J9 727 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 UNC93AQ86WB7 457 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 GSTCDQ8NEC7 633 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 HES6Q96HZ4 224 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 TWNKQ96RR1 684 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 GAD1Q99259 594 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 PSMB7Q99436 277 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 C11orf70Q9BRQ4 267 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 MRPL47Q9HD33 250 aaKnown RBP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 OGDHLQ9ULD0 1010 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 ALG6Q9Y672 507 aa9.46□□□□□ -0.9
CCDC47-207ENST00000612558 V9GYY5 206 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-207ENST00000612558 MEIS3P2A8K0S8 358 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 MIF4GDA9UHW6 222 aaKnown RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 KCNK3O14649 394 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 SPTLC1O15269 473 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 FAM163BP0C2L3 166 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 CCL5P13501 91 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 SELPP16109 830 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 LILRA4P59901 499 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 ITIH3Q06033 890 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 PTP4A2Q12974 167 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 BFSP2Q13515 415 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 MESDQ14696 234 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 STILQ15468 1287 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 SOWAHAQ2M3V2 549 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms