RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
SSX3-204ENST00000612497 TUBGCP4Q9UGJ1 667 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 APOBEC2Q9Y235 224 aaKnown RBP11.19□□□□□ -0.62
SSX3-204ENST00000612497 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 PCDH15Q96QU1 1955 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 OBSL1O75147 1896 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 ANK1P16157 1881 aa11.19□□□□□ -0.62
SSX3-204ENST00000612497 ZNF462Q96JM2 2506 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 MYO18AQ92614 2054 aaKnown RBP11.18□□□□□ -0.62
SSX3-204ENST00000612497 ARHGEF35A5YM69 484 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 ATF6P18850 670 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 CYP11B2P19099 503 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 IFNAR2P48551 515 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 NR1H3Q13133 447 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 BYSLQ13895 437 aaKnown RBP11.18□□□□□ -0.62
SSX3-204ENST00000612497 MTF1Q14872 753 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 SPDYCQ5MJ68 293 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
SSX3-204ENST00000612497 TXNDC8Q6A555 127 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 OVOS1Q6IE37 1185 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 PGBD3Q8N328 593 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 TMEM130Q8N3G9 435 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
SSX3-204ENST00000612497 CAPN10Q9HC96 672 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 HSFX1Q9UBD0 423 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 RAI2Q9Y5P3 530 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 WNT6Q9Y6F9 365 aa11.18□□□□□ -0.62
SSX3-204ENST00000612497 A0A087WV48 116 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 ANTXRLA6NF34 631 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 K7EQS6 105 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 SYPP08247 313 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 SPATA31C1P0DKV0 1188 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 MCF2P10911 925 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 HNRNPLP14866 589 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSX3-204ENST00000612497 RPS6KB1P23443 525 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 DDX6P26196 483 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSX3-204ENST00000612497 NLRP12P59046 1061 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 CYP4F3Q08477 520 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 SLC14A1Q13336 389 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 NBR1Q14596 966 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 TOGARAM2Q6ZUX3 1019 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 TMEM150AQ86TG1 271 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 SLCO6A1Q86UG4 719 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 NAXDQ8IW45 347 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 FBXL16Q8N461 479 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 OSCP1Q8WVF1 389 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 HMGB4Q8WW32 186 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 MRPS31Q92665 395 aaKnown RBP11.17□□□□□ -0.62
SSX3-204ENST00000612497 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
SSX3-204ENST00000612497 MRPL4Q9BYD3 311 aaKnown RBP11.17□□□□□ -0.62
SSX3-204ENST00000612497 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 TUFT1Q9NNX1 390 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 POLMQ9NP87 494 aaPredicted RBP11.17□□□□□ -0.62
SSX3-204ENST00000612497 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
SSX3-204ENST00000612497 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
SSX3-204ENST00000612497 MYO18BQ8IUG5 2567 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 ATXN7O15265 892 aaPredicted RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 AP5Z1O43299 807 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 F11P03951 625 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 ABCG1P45844 678 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 RPL6Q02878 288 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 SPAG1Q07617 926 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 SLC10A6Q3KNW5 377 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 SEZ6Q53EL9 994 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 EARS2Q5JPH6 523 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 ALLCQ8N6M5 410 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 TXNDC5Q8NBS9 432 aaKnown RBP11.16□□□□□ -0.62
SSX3-204ENST00000612497 PIP4K2CQ8TBX8 421 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 CFAP46Q8IYW2 2715 aa11.16□□□□□ -0.62
SSX3-204ENST00000612497 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 TRABD2BA6NFA1 517 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 J3QKU1 62 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 MED24O75448 989 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 KLF8O95600 359 aaPredicted RBP11.15□□□□□ -0.62
SSX3-204ENST00000612497 XBP1P17861 261 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 TYMPP19971 482 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 LRPAP1P30533 357 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 TIE1P35590 1138 aa11.15□□□□□ -0.62
SSX3-204ENST00000612497 AARSP49588 968 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms