RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 LEXMQ3ZCV2 418 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 ZACNQ401N2 412 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 CTXN3Q4LDR2 81 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 C1orf220Q5T0J3 134 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 TDRD10Q5VZ19 366 aaKnown RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 OVOS1Q6IE37 1185 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 SLC8B1Q6J4K2 584 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 ANKRD54Q6NXT1 300 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 LLGL2Q6P1M3 1020 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 LILRA6Q6PI73 481 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 SV2AQ7L0J3 742 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 DPH6Q7L8W6 267 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 FRMD5Q7Z6J6 570 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 METTL23Q86XA0 190 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 CCDC170Q8IYT3 715 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 VN1R2Q8NFZ6 395 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 FAM84AQ96KN4 292 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 EDEM3Q9BZQ6 932 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 PLEKHA4Q9H4M7 779 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 LZTFL1Q9NQ48 299 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 ARMCX3Q9UH62 379 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 TIMM13Q9Y5L4 95 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 CDY1Q9Y6F8 540 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 EYSQ5T1H1 3165 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 REV3LO60673 3130 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 OR6C75A6NL08 312 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 TGM5O43548 720 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 HUS1O60921 280 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 TBX10O75333 385 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 FAM163BP0C2L3 166 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 H2AFXP16104 143 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 EPCAMP16422 314 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 KRT83P78385 493 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 MRPS5P82675 430 aaKnown RBP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 NCOA4Q13772 614 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 ERCC6LQ2NKX8 1250 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 ARHGAP29Q52LW3 1261 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 KRT39Q6A163 491 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 C15orf39Q6ZRI6 1047 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 RTL10Q7L3V2 364 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 PALB2Q86YC2 1186 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 THEM5Q8N1Q8 247 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 TMEM86AQ8N2M4 240 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 MSLNLQ96KJ4 702 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 CARD6Q9BX69 1037 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 TMEM8AQ9HCN3 771 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 ZNHIT6Q9NWK9 470 aaKnown RBP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 CD207Q9UJ71 328 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 FBXL5Q9UKA1 691 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 MAFFQ9ULX9 164 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 BARX2Q9UMQ3 279 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 SNX9Q9Y5X1 595 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 V9GYY5 206 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-217ENST00000611848 TSC2P49815 1807 aa9.43□□□□□ -0.9
SMAD4-217ENST00000611848 EIF3CLB5ME19 914 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 H3BQ06 376 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ADAM12O43184 909 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ABL1P00519 1130 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 GCLMP48507 274 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ROR1Q01973 937 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 PPP3CAQ08209 521 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SGSM1Q2NKQ1 1148 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 CCDC40Q4G0X9 1142 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 WSCD1Q658N2 575 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TPGS2Q68CL5 300 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 LIMS2Q7Z4I7 341 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TRIM59Q8IWR1 403 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SMRP1Q8NCR6 262 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 MNS1Q8NEH6 495 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF461Q8TAF7 563 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TAF4BQ92750 862 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 EIF3CQ99613 913 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 NHEJ1Q9H9Q4 299 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 MAN1C1Q9NR34 630 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 FAM50BQ9Y247 325 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TCF20Q9UGU0 1960 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 CTAGE9A4FU28 777 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ABLIM3O94929 683 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 VNN1O95497 513 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 HLA-DRAP01903 254 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 P4HA1P13674 534 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ELF1P32519 619 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 LHX1P48742 406 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 MXI1P50539 228 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms