RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	CCDC89	Q8N998	374 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	RMI1	Q9H9A7	625 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	SAYSD1	Q9NPB0	183 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	NMRK1	Q9NWW6	199 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	NKIRAS1	Q9NYS0	192 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	PIM2	Q9P1W9	311 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	WHRN	Q9P202	907 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	NXF1	Q9UBU9	619 aa	Known RBP	12.09	□□□□□ -0.47
EP400-208	ENST00000611841	NRXN2	Q9P2S2	1712 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	QSER1	Q2KHR3	1735 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	PMM2	O15305	246 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	SPAG7	O75391	227 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	PIAS1	O75925	651 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	UNC5C	O95185	931 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	CST3	P01034	146 aa	Predicted RBP	12.09	□□□□□ -0.47
EP400-208	ENST00000611841	KRT1	P04264	644 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	KRT19	P08727	400 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	TCF4	P15884	667 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	EPHB2	P29323	1055 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	SLC1A1	P43005	524 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	FAM182A	Q5T1J6	154 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	CYP4X1	Q8N118	509 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	TRIM11	Q96F44	468 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	DDX27	Q96GQ7	796 aa	Known RBP	12.09	□□□□□ -0.47
EP400-208	ENST00000611841	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
EP400-208	ENST00000611841	TRAIP	Q9BWF2	469 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	YIPF2	Q9BWQ6	316 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	C10orf88	Q9H8K7	445 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ZWILCH	Q9H900	591 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	VPS37B	Q9H9H4	285 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	PGAP2	Q9UHJ9	254 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ZNF541	Q9H0D2	1346 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	MAFG	O15525	162 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	C4BPA	P04003	597 aa	Known RBP	12.09	□□□□□ -0.47
EP400-208	ENST00000611841	OAT	P04181	439 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	KRT15	P19012	456 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	GLRA2	P23416	452 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ERF	P50548	548 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	WDR78	Q5VTH9	848 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	THNSL1	Q8IYQ7	743 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ABRA	Q8N0Z2	381 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ZNF606	Q8WXB4	792 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ERP27	Q96DN0	273 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	CDHR1	Q96JP9	859 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ANKRD27	Q96NW4	1050 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	TEX13B	Q9BXU2	312 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	ACAD9	Q9H845	621 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	AS3MT	Q9HBK9	375 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	KIAA1586	Q9HCI6	787 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	NAALADL1	Q9UQQ1	740 aa		12.09	□□□□□ -0.47
EP400-208	ENST00000611841	COL11A2	P13942	1736 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841		F8VP50	259 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ABLIM1	O14639	778 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	VNN1	O95497	513 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ACADS	P16219	412 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	CCNF	P41002	786 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	TNFSF9	P41273	254 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	MGAT5	Q09328	741 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	TRPC3	Q13507	836 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	TCEAL1	Q15170	157 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	STXBP2	Q15833	593 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	CYP4A22	Q5TCH4	519 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	DCAF15	Q66K64	600 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	CEP128	Q6ZU80	1094 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	DTX3L	Q8TDB6	740 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	MCEE	Q96PE7	176 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	NINJ2	Q9NZG7	142 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ARHGAP28	Q9P2N2	729 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	SAE1	Q9UBE0	346 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	RASA4B	C9J798	803 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841		H0YCG3	227 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	RASA4	O43374	803 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	HNRNPR	O43390	633 aa	Known RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	SUPT20HL2	P0C7V6	817 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	PTPRA	P18433	802 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ATP5D	P30049	168 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	GPS1	Q13098	491 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	PSMD6	Q15008	389 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	SUPT20HL1	Q3ZLR7	823 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ANGEL2	Q5VTE6	544 aa	Known RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ABHD15	Q6UXT9	468 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	ANKS1B	Q7Z6G8	1248 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	GLIS1	Q8NBF1	620 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	MTMR14	Q8NCE2	650 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	RDM1	Q8NG50	284 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	FEZF2	Q8TBJ5	459 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	LRRC8C	Q8TDW0	803 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	DTNBP1	Q96EV8	351 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	HAPLN2	Q9GZV7	340 aa		12.08	□□□□□ -0.48
EP400-208	ENST00000611841	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.08	□□□□□ -0.48
EP400-208	ENST00000611841	TTLL13P	A6NNM8	815 aa		12.07	□□□□□ -0.48
EP400-208	ENST00000611841	SGK1	O00141	431 aa		12.07	□□□□□ -0.48
EP400-208	ENST00000611841	OAS1	P00973	400 aa	Known RBP	12.07	□□□□□ -0.48
EP400-208	ENST00000611841	FAM200B	P0CF97	657 aa		12.07	□□□□□ -0.48
EP400-208	ENST00000611841	MAN1A1	P33908	653 aa		12.07	□□□□□ -0.48
EP400-208	ENST00000611841	ARSE	P51690	589 aa		12.07	□□□□□ -0.48
EP400-208	ENST00000611841	USP46	P62068	366 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms