RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 GJA1P17302 382 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 ATF6P18850 670 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 TRIM21P19474 475 aaKnown RBP14.32□□□□□ -0.12
SENP3-209ENST00000610454 GABRR2P28476 465 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 CDC25CP30307 473 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 GNL1P36915 607 aaPredicted RBP14.32□□□□□ -0.12
SENP3-209ENST00000610454 PPP1R2P41236 205 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 CCR2P41597 374 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 PRCPP42785 496 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 PSMC1P62191 440 aaKnown RBP14.32□□□□□ -0.12
SENP3-209ENST00000610454 UBE2HP62256 183 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 DLG4P78352 724 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 CYP27A1Q02318 531 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 TEAD2Q15562 447 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 SIX5Q8N196 739 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 FLCNQ8NFG4 579 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 KBTBD7Q8WVZ9 684 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 FUBP3Q96I24 572 aaKnown RBP eCLIP14.32□□□□□ -0.12
SENP3-209ENST00000610454 MKNK1Q9BUB5 465 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
SENP3-209ENST00000610454 MMRN2Q9H8L6 949 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
SENP3-209ENST00000610454 WNT16Q9UBV4 365 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 A8MXQ7 604 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 STX10O60499 249 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 GADD45BO75293 160 aaPredicted RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 ECI2O75521 394 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 C4BPAP04003 597 aaKnown RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 TRIM49P0CI25 452 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 TRIM49CP0CI26 452 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 CSH1P0DML2 217 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 CSH2P0DML3 217 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 CYP2F1P24903 491 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ANXA13P27216 316 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 PFKPQ01813 784 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ZACNQ401N2 412 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 CFAP221Q4G0U5 840 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ZCWPW2Q504Y3 356 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SCARA5Q6ZMJ2 495 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SV2AQ7L0J3 742 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 TMC8Q8IU68 726 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SCN4BQ8IWT1 228 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SHKBP1Q8TBC3 707 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ZSCAN18Q8TBC5 510 aaPredicted RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 GPR152Q8TDT2 470 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 TAF4BQ92750 862 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SMARCD2Q92925 531 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ELSPBP1Q96BH3 223 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 ASB16Q96NS5 453 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 MRPL45Q9BRJ2 306 aaKnown RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 SLC2A4RGQ9NR83 387 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 UXTQ9UBK9 157 aaPredicted RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 RAPGEFL1Q9UHV5 662 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 CA14Q9ULX7 337 aa14.31□□□□□ -0.12
SENP3-209ENST00000610454 MAGED2Q9UNF1 606 aaPredicted RBP14.31□□□□□ -0.12
SENP3-209ENST00000610454 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 DPYSL4O14531 572 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 HCRTO43612 131 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 ATP2C2O75185 946 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 PDGFBP01127 241 aaPredicted RBP14.3□□□□□ -0.12
SENP3-209ENST00000610454 LMO2P25791 158 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 GPC5P78333 572 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 FKBP3Q00688 224 aaKnown RBP14.3□□□□□ -0.12
SENP3-209ENST00000610454 ENPEPQ07075 957 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 FAM78AQ5JUQ0 283 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 GPR158Q5T848 1215 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 TCERG1LQ5VWI1 586 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 ISM2Q6H9L7 571 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 MYLPFQ96A32 169 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 E2F7Q96AV8 911 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 EEF2KMTQ96G04 330 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 TNIP3Q96KP6 325 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 PRRX2Q99811 253 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 RPP25Q9BUL9 199 aaKnown RBP14.3□□□□□ -0.12
SENP3-209ENST00000610454 DNAI2Q9GZS0 605 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 KCNH6Q9H252 994 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 ZNF334Q9HCZ1 680 aaPredicted RBP14.3□□□□□ -0.12
SENP3-209ENST00000610454 ARHGEF3Q9NR81 526 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 MAN1B1Q9UKM7 699 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 ATP8B3O60423 1300 aa14.3□□□□□ -0.12
SENP3-209ENST00000610454 ZNF318Q5VUA4 2279 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 SLC16A3O15427 465 aaKnown RBP14.29□□□□□ -0.12
SENP3-209ENST00000610454 VNN1O95497 513 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 HLA-DRAP01903 254 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 GRIK1P39086 918 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 MAGEA11P43364 429 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 GCLMP48507 274 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 DDR2Q16832 855 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 DCAF17Q5H9S7 520 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms