RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 FOXR2Q6PJQ5 311 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
LINC00963-212ENST00000608669 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 GRASPQ7Z6J2 395 aaPredicted RBP13.03□□□□□ -0.32
LINC00963-212ENST00000608669 SCN4BQ8IWT1 228 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 C12orf29Q8N999 325 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 CCDC150Q8NCX0 1101 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 WHAMMQ8TF30 809 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 BCO2Q9BYV7 579 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 ADAM7Q9H2U9 754 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 COG5Q9UP83 839 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
LINC00963-212ENST00000608669 TACC1O75410 805 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 STAU1O95793 577 aaKnown RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 BDNFP23560 247 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 LHX1P48742 406 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 GPR17Q13304 367 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 SMAD4Q13485 552 aaKnown RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 CUL2Q13617 745 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 IQCB1Q15051 598 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 DDR2Q16832 855 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 WDR44Q5JSH3 913 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 SPATA2LQ8IUW3 424 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 FAM114A1Q8IWE2 563 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 KREMEN1Q96MU8 473 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 NT5C1BQ96P26 610 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 ASB2Q96Q27 587 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 CORO1BQ9BR76 489 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 MED10Q9BTT4 135 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 NDST4Q9H3R1 872 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 ACP6Q9NPH0 428 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 DZANK1Q9NVP4 752 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 CEP72Q9P209 647 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
LINC00963-212ENST00000608669 COQ4Q9Y3A0 265 aa13.02□□□□□ -0.33
LINC00963-212ENST00000608669 MYH10P35580 1976 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 LRG1P02750 347 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 PTPN1P18031 435 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 COPB1P53618 953 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 MCCD1P59942 119 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 MRPS5P82675 430 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 KCNMA1Q12791 1236 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 PLD1Q13393 1074 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 SLC5A9Q2M3M2 681 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 TRIM65Q6PJ69 517 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 GPR149Q86SP6 731 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 GPR65Q8IYL9 337 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 ITFG1Q8TB96 612 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 TCEAL4Q96EI5 215 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 ACBD6Q9BR61 282 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 LSM14BQ9BX40 385 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 ZNF334Q9HCZ1 680 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 CDH9Q9ULB4 789 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 MAGED2Q9UNF1 606 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-212ENST00000608669 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 MYO16Q9Y6X6 1858 aa13.01□□□□□ -0.33
LINC00963-212ENST00000608669 OBSL1O75147 1896 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
LINC00963-212ENST00000608669 EPHB6O15197 1021 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 NCK2O43639 380 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 CILPO75339 1184 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 BEST1O76090 585 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 MYL4P12829 197 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 BMP1P13497 986 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 P4HA1P13674 534 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 ZNF18P17022 549 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
LINC00963-212ENST00000608669 PON1P27169 355 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 PCSK1P29120 753 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 CCR2P41597 374 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 ENPEPQ07075 957 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 CBX2Q14781 532 aaPredicted RBP13□□□□□ -0.33
LINC00963-212ENST00000608669 STXBP5Q5T5C0 1151 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 TPGS2Q68CL5 300 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 CES5AQ6NT32 575 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 POTEHQ6S545 545 aa13□□□□□ -0.33
LINC00963-212ENST00000608669 APTXQ7Z2E3 356 aaKnown RBP13□□□□□ -0.33
LINC00963-212ENST00000608669 FAM35AQ86V20 835 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms