RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CSH2P0DML3 217 aa16■□□□□ 0.15
CTSA-216ENST00000607212 TGM1P22735 817 aa16■□□□□ 0.15
CTSA-216ENST00000607212 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.15
CTSA-216ENST00000607212 PXNP49023 591 aaPredicted RBP16■□□□□ 0.15
CTSA-216ENST00000607212 NLRP12P59046 1061 aa16■□□□□ 0.15
CTSA-216ENST00000607212 CEBPZQ03701 1054 aaKnown RBP16■□□□□ 0.15
CTSA-216ENST00000607212 PSMD2Q13200 908 aa16■□□□□ 0.15
CTSA-216ENST00000607212 RUNX3Q13761 415 aa16■□□□□ 0.15
CTSA-216ENST00000607212 CSRP2Q16527 193 aa16■□□□□ 0.15
CTSA-216ENST00000607212 NFE2Q16621 373 aaPredicted RBP16■□□□□ 0.15
CTSA-216ENST00000607212 PPM1JQ5JR12 505 aa16■□□□□ 0.15
CTSA-216ENST00000607212 TXNDC8Q6A555 127 aa16■□□□□ 0.15
CTSA-216ENST00000607212 IL31Q6EBC2 164 aa16■□□□□ 0.15
CTSA-216ENST00000607212 SV2BQ7L1I2 683 aa16■□□□□ 0.15
CTSA-216ENST00000607212 ZNF720Q7Z2F6 126 aa16■□□□□ 0.15
CTSA-216ENST00000607212 NT5DC4Q86YG4 428 aa16■□□□□ 0.15
CTSA-216ENST00000607212 FAM160A2Q8N612 972 aaPredicted RBP16■□□□□ 0.15
CTSA-216ENST00000607212 EXOC4Q96A65 974 aa16■□□□□ 0.15
CTSA-216ENST00000607212 FIZ1Q96SL8 496 aa16■□□□□ 0.15
CTSA-216ENST00000607212 CCSER1Q9C0I3 900 aa16■□□□□ 0.15
CTSA-216ENST00000607212 C2orf42Q9NWW7 574 aa16■□□□□ 0.15
CTSA-216ENST00000607212 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
CTSA-216ENST00000607212 RBAKQ9NYW8 714 aaPredicted RBP16■□□□□ 0.15
CTSA-216ENST00000607212 STK17AQ9UEE5 414 aa16■□□□□ 0.15
CTSA-216ENST00000607212 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 EXTL3O43909 919 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 ATG13O75143 517 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 PAPSS2O95340 614 aaPredicted RBP15.99■□□□□ 0.15
CTSA-216ENST00000607212 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 GAP43P17677 238 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 ACAT1P24752 427 aaKnown RBP15.99■□□□□ 0.15
CTSA-216ENST00000607212 WEE1P30291 646 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 RPL10AP62906 217 aaKnown RBP15.99■□□□□ 0.15
CTSA-216ENST00000607212 CCINQ13939 588 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 WDR44Q5JSH3 913 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 WDR5BQ86VZ2 330 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 SCN4BQ8IWT1 228 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 PDCL2Q8N4E4 241 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 USP13Q92995 863 aaPredicted RBP15.99■□□□□ 0.15
CTSA-216ENST00000607212 CHAMP1Q96JM3 812 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 ST6GALNAC4Q9H4F1 302 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 KIF9Q9HAQ2 790 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 TDP1Q9NUW8 608 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 TMLHEQ9NVH6 421 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 UXTQ9UBK9 157 aaPredicted RBP15.99■□□□□ 0.15
CTSA-216ENST00000607212 SEL1LQ9UBV2 794 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 CCL26Q9Y258 94 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 STYXL1Q9Y6J8 313 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 OBSL1O75147 1896 aa15.99■□□□□ 0.15
CTSA-216ENST00000607212 SLC30A4O14863 429 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 RPP40O75818 363 aaKnown RBP15.98■□□□□ 0.15
CTSA-216ENST00000607212 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
CTSA-216ENST00000607212 CKMP06732 381 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 IFNAR2P48551 515 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 CCDC6Q16204 474 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 DDR2Q16832 855 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
CTSA-216ENST00000607212 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
CTSA-216ENST00000607212 USP49Q70CQ1 688 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
CTSA-216ENST00000607212 BRSK2Q8IWQ3 736 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 ARRDC1-AS1Q9H2J1 176 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 PCIF1Q9H4Z3 704 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 HPS4Q9NQG7 708 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 SNX9Q9Y5X1 595 aa15.98■□□□□ 0.15
CTSA-216ENST00000607212 SPAG17Q6Q759 2223 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 GDF9O60383 454 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 FOXD2O60548 495 aaPredicted RBP15.97■□□□□ 0.15
CTSA-216ENST00000607212 RNF40O75150 1001 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 EGFP01133 1207 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 F11P03951 625 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 ARSAP15289 507 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 CYP2F1P24903 491 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 ADSSP30520 456 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 HOXC13P31276 330 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 STAT6P42226 847 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 POU5F1Q01860 360 aaKnown RBP15.97■□□□□ 0.15
CTSA-216ENST00000607212 KCNA1Q09470 495 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 INTS6LQ5JSJ4 861 aaKnown RBP15.97■□□□□ 0.15
CTSA-216ENST00000607212 FSTL4Q6MZW2 842 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 PKN3Q6P5Z2 889 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 CPA6Q8N4T0 437 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 ANKRD36BP1Q96IX9 119 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 PANK2Q9BZ23 570 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 DUS2Q9NX74 493 aaKnown RBP15.97■□□□□ 0.15
CTSA-216ENST00000607212 L1RE1Q9UN81 338 aa15.97■□□□□ 0.15
CTSA-216ENST00000607212 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 MYMKA6NI61 221 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 CLSTN1O94985 981 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms