RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 PPP2R5DQ14738 602 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 NFE2Q16621 373 aaPredicted RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 SOWAHAQ2M3V2 549 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 WDR44Q5JSH3 913 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 INTS6LQ5JSJ4 861 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 SDHAF4Q5VUM1 108 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CNNM4Q6P4Q7 775 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 TXNDC11Q6PKC3 985 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SHC4Q6S5L8 630 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 STXBP4Q6ZWJ1 553 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 EPM2AIP1Q7L775 607 aaPredicted RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 RALGPS2Q86X27 583 aaPredicted RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 CMTM8Q8IZV2 173 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 TOP6BLQ8N6T0 577 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CELF5Q8N6W0 485 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 MAB21L3Q8N8X9 362 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 IQUBQ8NA54 791 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 TTC8Q8TAM2 541 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 ZNF507Q8TCN5 953 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 NOC3LQ8WTT2 800 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 SNX21Q969T3 373 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 DHX58Q96C10 678 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 RMDN1Q96DB5 314 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GCNAQ96QF7 691 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 PKMYT1Q99640 499 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 C7orf25Q9BPX7 421 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 TRIM9Q9C026 710 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CUEDC2Q9H467 287 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 ABCB6Q9NP58 842 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GKN1Q9NS71 199 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 RBM12Q9NTZ6 932 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 INTS13Q9NVM9 706 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 THG1LQ9NWX6 298 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 ZMYM5Q9UJ78 669 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GTF3C4Q9UKN8 822 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SNX9Q9Y5X1 595 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 F5P12259 2224 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 COL4A2P08572 1712 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 PATJQ8NI35 1801 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
CUX1-219ENST00000606749 TGFB1I1O43294 461 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 TMEM191BP0C7N4 346 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 LMO2P25791 158 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 DDX6P26196 483 aaKnown RBP eCLIP8.18□□□□□ -1.1
CUX1-219ENST00000606749 CXCL12P48061 93 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 CCR3P51677 355 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 RPL10AP62906 217 aaKnown RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 ASIC1P78348 528 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 PLCB2Q00722 1185 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 MYL7Q01449 175 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 SATB1Q01826 763 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 TNK2Q07912 1038 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 PON2Q15165 354 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 SURF1Q15526 300 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 DDR2Q16832 855 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 ITPRIPL2Q3MIP1 535 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 DGKKQ5KSL6 1271 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 LMBRD2Q68DH5 695 aaPredicted RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 TXNDC8Q6A555 127 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 FAM171BQ6P995 826 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 DPH6Q7L8W6 267 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 LIMS2Q7Z4I7 341 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 MON1AQ86VX9 555 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 OSTM1Q86WC4 334 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 CBWD2Q8IUF1 395 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 ADGRF2Q8IZF7 708 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 SPEM1Q8N4L4 309 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 RDH13Q8NBN7 331 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 STKLD1Q8NE28 680 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 OR5B17Q8NGF7 314 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 SPATA18Q8TC71 538 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 USP13Q92995 863 aaPredicted RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 HPDLQ96IR7 371 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 MYRFLQ96LU7 910 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 FAM83CQ9BQN1 747 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 KIAA1586Q9HCI6 787 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 TDP1Q9NUW8 608 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 HSPBP1Q9NZL4 362 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 NCDNQ9UBB6 729 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 MAGED2Q9UNF1 606 aaPredicted RBP8.18□□□□□ -1.1
CUX1-219ENST00000606749 CCL26Q9Y258 94 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 PTPRJQ12913 1337 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 WDR87Q6ZQQ6 2873 aa8.18□□□□□ -1.1
CUX1-219ENST00000606749 TSC2P49815 1807 aa8.17□□□□□ -1.1
CUX1-219ENST00000606749 TCHHQ07283 1943 aa8.17□□□□□ -1.1
CUX1-219ENST00000606749 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
CUX1-219ENST00000606749 POLR2DO15514 142 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms