RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 FOXD4L1Q9NU39 408 aa26.17■■□□□ 1.78
SNX5-219ENST00000606602 ZMYM5Q9UJ78 669 aa26.17■■□□□ 1.78
SNX5-219ENST00000606602 ITGA11Q9UKX5 1188 aa26.17■■□□□ 1.78
SNX5-219ENST00000606602 MORC2Q9Y6X9 1032 aaPredicted RBP26.17■■□□□ 1.78
SNX5-219ENST00000606602 PRPF6O94906 941 aaKnown RBP26.16■■□□□ 1.78
SNX5-219ENST00000606602 F11P03951 625 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 KRT19P08727 400 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 AVPR1AP37288 418 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 NLRP12P59046 1061 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 ITPRIPL2Q3MIP1 535 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 SCARA3Q6AZY7 606 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 TMEM150AQ86TG1 271 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 CCDC65Q8IXS2 484 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 MAB21L3Q8N8X9 362 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 INTS4Q96HW7 963 aaKnown RBP26.16■■□□□ 1.78
SNX5-219ENST00000606602 ACBD6Q9BR61 282 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 ZSCAN16Q9H4T2 348 aaPredicted RBP26.16■■□□□ 1.78
SNX5-219ENST00000606602 PDE11AQ9HCR9 933 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 GKN1Q9NS71 199 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 DDX43Q9NXZ2 648 aaKnown RBP26.16■■□□□ 1.78
SNX5-219ENST00000606602 USP18Q9UMW8 372 aa26.16■■□□□ 1.78
SNX5-219ENST00000606602 MAGED2Q9UNF1 606 aaPredicted RBP26.16■■□□□ 1.78
SNX5-219ENST00000606602 MED19A0JLT2 244 aaPredicted RBP26.15■■□□□ 1.78
SNX5-219ENST00000606602 CHURC1-FNTBB4DL54 471 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 ACAT1P24752 427 aaKnown RBP26.15■■□□□ 1.78
SNX5-219ENST00000606602 FNTBP49356 437 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 RBP5P82980 135 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 MYL7Q01449 175 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 SDHAF4Q5VUM1 108 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 PRR23BQ6ZRT6 265 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 TMEM86AQ8N2M4 240 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 STKLD1Q8NE28 680 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 SNX9Q9Y5X1 595 aa26.15■■□□□ 1.78
SNX5-219ENST00000606602 TMEM191BP0C7N4 346 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 CSH1P0DML2 217 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 CSH2P0DML3 217 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 DDX6P26196 483 aaKnown RBP eCLIP26.14■■□□□ 1.78
SNX5-219ENST00000606602 DMWDQ09019 674 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 DDR2Q16832 855 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 INTS6LQ5JSJ4 861 aaKnown RBP26.14■■□□□ 1.78
SNX5-219ENST00000606602 TXNDC8Q6A555 127 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 CXorf38Q8TB03 319 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 LEO1Q8WVC0 666 aaPredicted RBP26.14■■□□□ 1.78
SNX5-219ENST00000606602 MRPS31Q92665 395 aaKnown RBP26.14■■□□□ 1.78
SNX5-219ENST00000606602 MTMR12Q9C0I1 747 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 GDAP2Q9NXN4 497 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 GTF3C4Q9UKN8 822 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 CCL26Q9Y258 94 aa26.14■■□□□ 1.78
SNX5-219ENST00000606602 DNAH14Q0VDD8 3507 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 CYP2F1P24903 491 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 RPL10AP62906 217 aaKnown RBP26.13■■□□□ 1.77
SNX5-219ENST00000606602 LMNB2Q03252 620 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 CCINQ13939 588 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 STK38Q15208 465 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 HEATR6Q6AI08 1181 aaKnown RBP26.13■■□□□ 1.77
SNX5-219ENST00000606602 LAIR1Q6GTX8 287 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 GPD1LQ8N335 351 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 USP13Q92995 863 aaPredicted RBP26.13■■□□□ 1.77
SNX5-219ENST00000606602 ABCB6Q9NP58 842 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 TDP1Q9NUW8 608 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 SIX4Q9UIU6 781 aa26.13■■□□□ 1.77
SNX5-219ENST00000606602 R3HCC1Q9Y3T6 440 aaKnown RBP26.13■■□□□ 1.77
SNX5-219ENST00000606602 CEP250Q9BV73 2442 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 K7ESF4 209 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 STX6O43752 255 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 PAPSS2O95340 614 aaPredicted RBP26.12■■□□□ 1.77
SNX5-219ENST00000606602 SDHBP21912 280 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 TGM1P22735 817 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 NASPP49321 788 aaPredicted RBP26.12■■□□□ 1.77
SNX5-219ENST00000606602 SIM2Q14190 667 aaPredicted RBP26.12■■□□□ 1.77
SNX5-219ENST00000606602 LMBRD2Q68DH5 695 aaPredicted RBP26.12■■□□□ 1.77
SNX5-219ENST00000606602 STXBP4Q6ZWJ1 553 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 MON1AQ86VX9 555 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 OSTM1Q86WC4 334 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 ADGRF2Q8IZF7 708 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 SYNPOQ8N3V7 929 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 TOP6BLQ8N6T0 577 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 FAM83CQ9BQN1 747 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 PARD6AQ9NPB6 346 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 C2orf42Q9NWW7 574 aa26.12■■□□□ 1.77
SNX5-219ENST00000606602 NUP210Q8TEM1 1887 aaPredicted RBP26.11■■□□□ 1.77
SNX5-219ENST00000606602 PRR5-ARHGAP8B1AHC4 643 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 HRO43593 1189 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 LHX1P48742 406 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 ARHGAP8P85298 464 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 RUNX3Q13761 415 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 LONP2Q86WA8 852 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 GLIS3Q8NEA6 775 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 HPS3Q969F9 1004 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 ANKRD36BP1Q96IX9 119 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 PKMYT1Q99640 499 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 LRRC27Q9C0I9 530 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 EBF3Q9H4W6 596 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 KIF9Q9HAQ2 790 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 HPS4Q9NQG7 708 aa26.11■■□□□ 1.77
SNX5-219ENST00000606602 SOBPA7XYQ1 873 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 KIAA0391O15091 583 aaKnown RBP26.1■■□□□ 1.77
SNX5-219ENST00000606602 HCRTO43612 131 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 PCSK1P29120 753 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 SPEM2Q0P670 501 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms