RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 EIF4BP23588 611 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HNRNPH1P31943 449 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CETN2P41208 172 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CDKN2BP42772 138 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 NRLP54845 237 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PSMC1P62191 440 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CAV1Q03135 178 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TFDP3Q5H9I0 405 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ERO1BQ86YB8 467 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 FDXACB1Q9BRP7 624 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MAF1Q9H063 256 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TCP11X1B4DZS4 312 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SGK1O00141 431 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 VTNP04004 478 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 INSRRP14616 1297 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RAD23BP54727 409 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GRM1Q13255 1194 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCDC197Q8NCU1 140 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCT6BQ92526 530 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SYNCQ9H7C4 482 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ADARB2Q9NS39 739 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 FGFR1OP2Q9NVK5 253 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CEP83Q9Y592 693 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 BRCA2P51587 3418 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 DNAJC25-GNG10A0A024R161 153 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 B4GALT4O60513 344 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LRCH4O75427 683 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 STAG3L1P0CL83 205 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GDF10P55107 478 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PIGHQ14442 188 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZNF667Q5HYK9 610 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PIGWQ7Z7B1 504 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ALLCQ8N6M5 410 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 POC1B-GALNT4F8VUJ3 575 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ERBB2P04626 1255 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TMED2Q15363 201 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 OASLQ15646 514 aaKnown RBP12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZKSCAN8Q15776 578 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SH3PXD2AQ5TCZ1 1133 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZCCHC9Q8N567 271 aaKnown RBP12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 OPTNQ96CV9 577 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PCDHGC3Q9UN70 934 aa12.43□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LOC285556D6RIA3 1793 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C3orf70A6NLC5 250 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 DNALI1O14645 258 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HGSO14964 777 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CST8O60676 142 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC25A27O95847 323 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZNF286BP0CG31 522 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CDH5P33151 784 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MOGSQ13724 837 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ACTL9Q8TC94 416 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZNF518BQ9C0D4 1074 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ELOVL4Q9GZR5 314 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KIF9Q9HAQ2 790 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RNF19AQ9NV58 838 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HBP1O60381 514 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SPAG7O75391 227 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C22orf31O95567 290 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SCTRP47872 440 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC25A11Q02978 314 aaKnown RBP12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TFDP1Q14186 410 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SURF1Q15526 300 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LRRC38Q5VT99 294 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKRD13AQ8IZ07 590 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ZBED8Q8IZ13 594 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SAMD15Q9P1V8 674 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SIGLEC16A6NMB1 481 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RASA4BC9J798 803 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ASAP2O43150 1006 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RASA4O43374 803 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CDH16O75309 829 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 YWHAEP62258 255 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PPP1R2P3Q6NXS1 205 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms