RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	VIT	Q6UXI7	678 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	CCDC105	Q8IYK2	499 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	FAM200A	Q8TCP9	573 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	KBTBD7	Q8WVZ9	684 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	DNASE1L2	Q92874	299 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	CCDC47	Q96A33	483 aa	Known RBP	13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	SHD	Q96IW2	340 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	PI4K2A	Q9BTU6	479 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	MKNK1	Q9BUB5	465 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	DDX23	Q9BUQ8	820 aa	Known RBP	13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	IL21	Q9HBE4	155 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	ABCB6	Q9NP58	842 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	GTF3C4	Q9UKN8	822 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	HELZ	P42694	1942 aa	Known RBP	13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	NCAN	O14594	1321 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	MYO15A	Q9UKN7	3530 aa		13.3	□□□□□ -0.28
STRN4-223	ENST00000602223	KIF20A	O95235	890 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	NR3C1	P04150	777 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	PSMC3	P17980	439 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	WARS	P23381	471 aa	Known RBP	13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	CASP4	P49662	377 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	GPR15	P49685	360 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	CLDN10	P78369	228 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	GRM2	Q14416	872 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	STXBP5	Q5T5C0	1151 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	FAM171B	Q6P995	826 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	PARD3B	Q8TEW8	1205 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	GIPC2	Q8TF65	315 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	DEPDC1B	Q8WUY9	529 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	E2F7	Q96AV8	911 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	ATXN3L	Q9H3M9	355 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	SLITRK6	Q9H5Y7	841 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	CDH9	Q9ULB4	789 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	TRAF3IP3	Q9Y228	551 aa		13.29	□□□□□ -0.28
STRN4-223	ENST00000602223	DMD	P11532	3685 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	KANSL1L	A0AUZ9	987 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	MYBPHL	A2RUH7	354 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	HEPACAM2	A8MVW5	462 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223		H0Y858	1186 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CALU	O43852	315 aa	Predicted RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TACC1	O75410	805 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	C4BPA	P04003	597 aa	Known RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	FAM163B	P0C2L3	166 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	HMGA1	P17096	107 aa	Known RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CYP2F1	P24903	491 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	LMO2	P25791	158 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CDC25C	P30307	473 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	ATIC	P31939	592 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	VIPR2	P41587	438 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	AP3M2	P53677	418 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TRPC3	Q13507	836 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TAF12	Q16514	161 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	NFIL3	Q16649	462 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CCDC142	Q17RM4	750 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CFAP221	Q4G0U5	840 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	ARHGAP15	Q53QZ3	475 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	GPR158	Q5T848	1215 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TDRD10	Q5VZ19	366 aa	Known RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	MFSD6L	Q8IWD5	586 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	GUF1	Q8N442	669 aa	Known RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	DTWD2	Q8NBA8	298 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	PJA1	Q8NG27	643 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	RSPRY1	Q96DX4	576 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	CCDC34	Q96HJ3	373 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	GCNA	Q96QF7	691 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	MMS19	Q96T76	1030 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	PHOX2B	Q99453	314 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	SYT15	Q9BQS2	421 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TRMT61B	Q9BVS5	477 aa	Known RBP	13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	FOXQ1	Q9C009	403 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	XYLT2	Q9H1B5	865 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	VRTN	Q9H8Y1	702 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	TRPV5	Q9NQA5	729 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	DLGAP2	Q9P1A6	1054 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	SIT1	Q9Y3P8	196 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	NME7	Q9Y5B8	376 aa		13.28	□□□□□ -0.28
STRN4-223	ENST00000602223	ATP2C2	O75185	946 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	F11	P03951	625 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	CSH1	P0DML2	217 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	CSH2	P0DML3	217 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	WEE1	P30291	646 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	GDI1	P31150	447 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	MYL6	P60660	151 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	PSMC1	P62191	440 aa	Known RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	RPL10A	P62906	217 aa	Known RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	TNNC1	P63316	161 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	CYP4F8	P98187	520 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	DDR2	Q16832	855 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	WDR72	Q3MJ13	1102 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	C4orf50	Q6ZRC1	276 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	TMEM150A	Q86TG1	271 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	ALYREF	Q86V81	257 aa	Known RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	IRF7	Q92985	503 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	MYLPF	Q96A32	169 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms