RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 CPB1P15086 417 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 TBXAS1P24557 533 aaPredicted RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 ANXA13P27216 316 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 PCSK1P29120 753 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 NRIP1P48552 1158 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 JAM2P57087 298 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 YWHAEP62258 255 aaKnown RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 ETF1P62495 437 aaKnown RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 TSPY1Q01534 308 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 SMARCB1Q12824 385 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 ASIC2Q16515 512 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 DUSP6Q16828 381 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 TCEAL5Q5H9L2 206 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 HGSNATQ68CP4 663 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 PRSS55Q6UWB4 352 aaPredicted RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 AUTS2Q8WXX7 1259 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 B3GALT6Q96L58 329 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 FAM81BQ96LP2 452 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 CCDC42Q96M95 316 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 NIF3L1Q9GZT8 377 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 FAM124BQ9H5Z6 455 aaPredicted RBP10.75□□□□□ -0.69
UPF1-213ENST00000601981 RXFP1Q9HBX9 757 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 ARHGAP20Q9P2F6 1191 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 APEX2Q9UBZ4 518 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 COQ4Q9Y3A0 265 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 PAXBP1Q9Y5B6 917 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 FHOD1Q9Y613 1164 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 HIDE1A8MVS5 230 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 TEX28O15482 410 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 TACC1O75410 805 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 GLUD1P00367 558 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 CNPP09543 421 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 ELF1P32519 619 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 EIF4A3P38919 411 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 PRKCIP41743 596 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 KIF11P52732 1056 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 APBA1Q02410 837 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 RAPGEF1Q13905 1077 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 MRPL58Q14197 206 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 MAPRE1Q15691 268 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 ARHGAP29Q52LW3 1261 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 WSCD1Q658N2 575 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 IQCEQ6IPM2 695 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
UPF1-213ENST00000601981 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 TMEM130Q8N3G9 435 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 TXLNBQ8N3L3 684 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 PDCL2Q8N4E4 241 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 LMO3Q8TAP4 145 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 CASP10Q92851 521 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 NT5C1BQ96P26 610 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 KLHL5Q96PQ7 755 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 SPAG5Q96R06 1193 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 XYLT2Q9H1B5 865 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 DEF6Q9H4E7 631 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 IGFLR1Q9H665 355 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 CYP3A43Q9HB55 503 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 L1RE1Q9UN81 338 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 REXO2Q9Y3B8 237 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 TIMM13Q9Y5L4 95 aaPredicted RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 BZW2Q9Y6E2 419 aaKnown RBP10.74□□□□□ -0.69
UPF1-213ENST00000601981 CDY1Q9Y6F8 540 aa10.74□□□□□ -0.69
UPF1-213ENST00000601981 MUC3AQ02505 3323 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 KIF5CO60282 957 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 LILRB3O75022 631 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 CLASP2O75122 1294 aaKnown RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 FERP16591 822 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 WARSP23381 471 aaKnown RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 IGFBP6P24592 240 aaPredicted RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 OR1D2P34982 312 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 STAT1P42224 750 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 ARHGAP25P42331 645 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 ARPP19P56211 112 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 SPA17Q15506 151 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 SOWAHAQ2M3V2 549 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 ASTE1Q2TB18 679 aaPredicted RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 LIN9Q5TKA1 542 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 TPGS2Q68CL5 300 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 SCARA5Q6ZMJ2 495 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 EP400NLQ6ZTU2 488 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 ADGRD2Q7Z7M1 963 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 EFHBQ8N7U6 833 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 OR6B3Q8NGW1 331 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
UPF1-213ENST00000601981 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 PPM1EQ8WY54 764 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 TNIP3Q96KP6 325 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 CLSTN3Q9BQT9 956 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 ACBD6Q9BR61 282 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 PI4K2AQ9BTU6 479 aa10.73□□□□□ -0.69
UPF1-213ENST00000601981 STK33Q9BYT3 514 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms