RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DPEP3Q9H4B8 488 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 PRKAG2Q9UGJ0 569 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 MYH10P35580 1976 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 TBKBP1A7MCY6 615 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 ENC1O14682 589 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 ATMINO43313 823 aaPredicted RBP19.07■□□□□ 0.64
VRK3-225ENST00000601912 TRAPPC3O43617 180 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 MTA2O94776 668 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 KIF4AO95239 1232 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 ITGB8P26012 769 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 BRCC3P46736 316 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 GOLGA7BQ2TAP0 167 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 PPP1R26Q5T8A7 1209 aaPredicted RBP19.07■□□□□ 0.64
VRK3-225ENST00000601912 CD300LGQ6UXG3 332 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.64
VRK3-225ENST00000601912 DAAM2Q86T65 1068 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 B3GALNT2Q8NCR0 500 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 ZNF564Q8TBZ8 553 aaPredicted RBP19.07■□□□□ 0.64
VRK3-225ENST00000601912 HASPINQ8TF76 798 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 SUSD3Q96L08 255 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 MRPL47Q9HD33 250 aaKnown RBP19.07■□□□□ 0.64
VRK3-225ENST00000601912 FAM49BQ9NUQ9 324 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 STRIP2Q9ULQ0 834 aa19.07■□□□□ 0.64
VRK3-225ENST00000601912 MICAL3Q7RTP6 2002 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 UPP2O95045 317 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 ALDH2P05091 517 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 CYP11A1P05108 521 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 RRM1P23921 792 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 PCSK1P29120 753 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 GATMP50440 423 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 UBA3Q8TBC4 463 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 NRDE2Q9H7Z3 1164 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 COG5Q9UP83 839 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 TIMM13Q9Y5L4 95 aaPredicted RBP19.06■□□□□ 0.64
VRK3-225ENST00000601912 SCINQ9Y6U3 715 aa19.06■□□□□ 0.64
VRK3-225ENST00000601912 I3L4J1 428 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 HCRTO43612 131 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 B4GALT3O60512 393 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 TADA2AO75478 443 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 AMHP03971 560 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 ATP1A1P05023 1023 aaKnown RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 PTPN1P18031 435 aaKnown RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 TYMPP19971 482 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 GPD2P43304 727 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 PTP4A2Q12974 167 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 PAPD7Q5XG87 772 aaKnown RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 LRRC43Q8N309 656 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 LRRC57Q8N9N7 239 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 VWCEQ96DN2 955 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 COLEC11Q9BWP8 271 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 MIS12Q9H081 205 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 PARVAQ9NVD7 372 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 DNAJB4Q9UDY4 337 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 CDH9Q9ULB4 789 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 PCDHB8Q9UN66 801 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 PRG3Q9Y2Y8 225 aaPredicted RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 BUB1BO60566 1050 aaPredicted RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 ITGB1P05556 798 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 SETSIPP0DME0 302 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 SNX16P57768 344 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 C2CD6Q53TS8 623 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 SLFN11Q7Z7L1 901 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 THEM5Q8N1Q8 247 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 IPO4Q8TEX9 1081 aaKnown RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 TMEM175Q9BSA9 504 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 L2HGDHQ9H9P8 463 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 CHORDC1Q9UHD1 332 aaPredicted RBP19.05■□□□□ 0.64
VRK3-225ENST00000601912 FAN1Q9Y2M0 1017 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 SAR1BQ9Y6B6 198 aa19.05■□□□□ 0.64
VRK3-225ENST00000601912 CAPN15O75808 1086 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 FTCDO95954 541 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 ACAT1P24752 427 aaKnown RBP19.04■□□□□ 0.64
VRK3-225ENST00000601912 SLC8A3P57103 927 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 PSMC1P62191 440 aaKnown RBP19.04■□□□□ 0.64
VRK3-225ENST00000601912 PDCLQ13371 301 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 MEI1Q5TIA1 1274 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 OVOS1Q6IE37 1185 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 PLEKHA7Q6IQ23 1121 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 PEX26Q7Z412 305 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 ANKRD52Q8NB46 1076 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 UBE2Q2Q8WVN8 375 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 SYT15Q9BQS2 421 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 WDR35Q9P2L0 1181 aa19.04■□□□□ 0.64
VRK3-225ENST00000601912 NRP1O14786 923 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 DGKIO75912 1065 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 BAIAP3O94812 1187 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 CCDC130P13994 396 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 ADORA2BP29275 332 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 BCAT1P54687 386 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 MAMLD1Q13495 774 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 PTPN20Q4JDL3 420 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 PKDCCQ504Y2 493 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 C11orf63Q6NUN7 778 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 PHLDB2Q86SQ0 1253 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 SLC2A14Q8TDB8 520 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 TOP1MTQ969P6 601 aa19.03■□□□□ 0.64
VRK3-225ENST00000601912 HNRNPABQ99729 332 aaKnown RBP19.03■□□□□ 0.64
VRK3-225ENST00000601912 ACBD6Q9BR61 282 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms