RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C4BPAP04003 597 aaKnown RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 ACAT1P24752 427 aaKnown RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 DLG4P78352 724 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 BIRC3Q13489 604 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 NCOA4Q13772 614 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 MAPRE1Q15691 268 aaKnown RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 WDR72Q3MJ13 1102 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 FAM171BQ6P995 826 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 SMARCE1Q969G3 411 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 ASB16Q96NS5 453 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 MMS19Q96T76 1030 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 LPIN3Q9BQK8 851 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 SYT15Q9BQS2 421 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 MKNK1Q9BUB5 465 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 RPP25Q9BUL9 199 aaKnown RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 TRPV4Q9HBA0 871 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 PCDHA5Q9Y5H7 936 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 VNN1O95497 513 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 CFHP08603 1231 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
HERC3-214ENST00000601319 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
HERC3-214ENST00000601319 MAGEA11P43364 429 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 NUBP1P53384 320 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 RPL10AP62906 217 aaKnown RBP18.39■□□□□ 0.53
HERC3-214ENST00000601319 ZNF699Q32M78 642 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 FAM78AQ5JUQ0 283 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 C1orf220Q5T0J3 134 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 C4orf50Q6ZRC1 276 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 FAM186BQ8IYM0 893 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 GPR152Q8TDT2 470 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 TAF4BQ92750 862 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 SMARCD2Q92925 531 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 PRRX2Q99811 253 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 ZNF334Q9HCZ1 680 aaPredicted RBP18.39■□□□□ 0.53
HERC3-214ENST00000601319 GTF3C4Q9UKN8 822 aa18.39■□□□□ 0.53
HERC3-214ENST00000601319 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 HCRTO43612 131 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 CDC25CP30307 473 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 PRCPP42785 496 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 CLCN5P51795 746 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 VAMP7P51809 220 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 VCPP55072 806 aaKnown RBP18.38■□□□□ 0.53
HERC3-214ENST00000601319 PFKPQ01813 784 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 ADAM9Q13443 819 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 TEAD2Q15562 447 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 ZNF667Q5HYK9 610 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 CWF19L1Q69YN2 538 aaKnown RBP18.38■□□□□ 0.53
HERC3-214ENST00000601319 GAREM2Q75VX8 874 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 SV2AQ7L0J3 742 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 SPATA2LQ8IUW3 424 aaPredicted RBP18.38■□□□□ 0.53
HERC3-214ENST00000601319 ZC3H3Q8IXZ2 948 aaKnown RBP18.38■□□□□ 0.53
HERC3-214ENST00000601319 SIX5Q8N196 739 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 FAM200AQ8TCP9 573 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 MRPL45Q9BRJ2 306 aaKnown RBP18.38■□□□□ 0.53
HERC3-214ENST00000601319 PI4K2AQ9BTU6 479 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 SNX25Q9H3E2 840 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 MFSD1Q9H3U5 465 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 IL21Q9HBE4 155 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 CRTAC1Q9NQ79 661 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 ARHGEF3Q9NR81 526 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 ZMYM5Q9UJ78 669 aa18.38■□□□□ 0.53
HERC3-214ENST00000601319 MYBPHLA2RUH7 354 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 KRBA1A5PL33 1030 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 KRT13P13646 458 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 HMGA1P17096 107 aaKnown RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 GJA1P17302 382 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 LMO2P25791 158 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 GABRR2P28476 465 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 WEE1P30291 646 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 AVPR2P30518 371 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 GPC5P78333 572 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 LRRC63Q05C16 580 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 CCDC142Q17RM4 750 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 ASTLQ6HA08 431 aaPredicted RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 TANGO2Q6ICL3 276 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 ST13P5Q8NFI4 369 aaPredicted RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 ZSCAN18Q8TBC5 510 aaPredicted RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 MYCBPAPQ8TBZ2 947 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 TRMT2BQ96GJ1 504 aaKnown RBP18.37■□□□□ 0.53
HERC3-214ENST00000601319 ZSWIM3Q96MP5 696 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 ZFP14Q9HCL3 533 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 NME7Q9Y5B8 376 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 MYH10P35580 1976 aa18.37■□□□□ 0.53
HERC3-214ENST00000601319 ATP2C2O75185 946 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 NOL4O94818 638 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
HERC3-214ENST00000601319 CSH1P0DML2 217 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 CSH2P0DML3 217 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 P4HA1P13674 534 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 NPR3P17342 541 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 CYP2F1P24903 491 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 GTF2H1P32780 548 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 GNL1P36915 607 aaPredicted RBP18.36■□□□□ 0.53
HERC3-214ENST00000601319 PPP1R2P41236 205 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms