RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CCDC85CA6NKD9 419 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 ABL1P00519 1130 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 BCAR1P56945 870 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 BTG3Q14201 252 aaPredicted RBP23.95■■□□□ 1.43
IRF3-228ENST00000601291 GOLGA7BQ2TAP0 167 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 TMEM240Q5SV17 173 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 OVOS1Q6IE37 1185 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 DENND1BQ6P3S1 775 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 TMCO2Q7Z6W1 182 aaPredicted RBP23.95■■□□□ 1.43
IRF3-228ENST00000601291 C1orf131Q8NDD1 294 aaKnown RBP23.95■■□□□ 1.43
IRF3-228ENST00000601291 YME1L1Q96TA2 773 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 SYT15Q9BQS2 421 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 THAP2Q9H0W7 228 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 CDH9Q9ULB4 789 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 DUSP10Q9Y6W6 482 aa23.95■■□□□ 1.43
IRF3-228ENST00000601291 A0A0A6YYK5 440 aaPredicted RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 NCANO14594 1321 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 SYN3O14994 580 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 MYBL1P10243 752 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 PTPN1P18031 435 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 ACAT1P24752 427 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 TSC2P49815 1807 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 PSMC1P62191 440 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 GPC5P78333 572 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 YWHAHQ04917 246 aaPredicted RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 COL4A6Q14031 1691 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 SPOUT1Q5T280 376 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 PPP1R26Q5T8A7 1209 aaPredicted RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 PHF13Q86YI8 300 aaPredicted RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 RNF10Q8N5U6 811 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 ZNF653Q96CK0 615 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 NOX5Q96PH1 765 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.95■■□□□ 1.421e-10■■□□□ 11.4
IRF3-228ENST00000601291 MTIF3Q9H2K0 278 aaKnown RBP23.95■■□□□ 1.42
IRF3-228ENST00000601291 CWH43Q9H720 699 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 MARCH5Q9NX47 278 aa23.95■■□□□ 1.42
IRF3-228ENST00000601291 FAM170AA1A519 330 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 TNNT1P13805 278 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 EPHB4P54760 987 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 NAP1L1P55209 391 aaKnown RBP23.94■■□□□ 1.42
IRF3-228ENST00000601291 GNG11P61952 73 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 IFI16Q16666 785 aaKnown RBP23.94■■□□□ 1.42
IRF3-228ENST00000601291 DNTTIP2Q5QJE6 756 aaKnown RBP23.94■■□□□ 1.42
IRF3-228ENST00000601291 MSANTD4Q8NCY6 345 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 RFFLQ8WZ73 363 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 ACBD6Q9BR61 282 aa23.94■■□□□ 1.42
IRF3-228ENST00000601291 ETF1P62495 437 aaKnown RBP23.93■■□□□ 1.42
IRF3-228ENST00000601291 C1QBPQ07021 282 aaKnown RBP23.93■■□□□ 1.42
IRF3-228ENST00000601291 FUT10Q6P4F1 479 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 MON1BQ7L1V2 547 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 RHOT2Q8IXI1 618 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 MCOLN2Q8IZK6 566 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 HERVK_113Q902F9 699 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 VCPIP1Q96JH7 1222 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 ADAM22Q9P0K1 906 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 GTF3C4Q9UKN8 822 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 PAXBP1Q9Y5B6 917 aa23.93■■□□□ 1.42
IRF3-228ENST00000601291 LAG3P18627 525 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 TKTP29401 623 aaKnown RBP23.92■■□□□ 1.42
IRF3-228ENST00000601291 PBX3P40426 434 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 LIN9Q5TKA1 542 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 ZNF558Q96NG5 402 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 ALS2CR12Q96Q35 445 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 SLC9A7Q96T83 725 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 C11orf70Q9BRQ4 267 aa23.92■■□□□ 1.42
IRF3-228ENST00000601291 IRX2Q9BZI1 471 aaPredicted RBP23.92■■□□□ 1.42
IRF3-228ENST00000601291 RRAGDQ9NQL2 400 aaPredicted RBP23.92■■□□□ 1.42
IRF3-228ENST00000601291 NT5C1B-RDH14C9J2C7 533 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 GJB5O95377 273 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CALB1P05937 261 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 SETSIPP0DME0 302 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CCDC130P13994 396 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 MMP8P22894 467 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 TSPY1Q01534 308 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 MDH1BQ5I0G3 518 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ZNF569Q5MCW4 686 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 FAM171A1Q5VUB5 890 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 MMS22LQ6ZRQ5 1243 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ERICH1Q86X53 443 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 SLC2A14Q8TDB8 520 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ZBED2Q9BTP6 218 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CNOT8Q9UFF9 292 aaKnown RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 SLC4A7Q9Y6M7 1214 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 BUB1O43683 1085 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ATP2C2O75185 946 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 MOCS3O95396 460 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ADORA2BP29275 332 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 GPD2P43304 727 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 NOP2P46087 812 aaKnown RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 BCAT1P54687 386 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 INTS6LQ5JSJ4 861 aaKnown RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 KCNT2Q6UVM3 1135 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 WDTC1Q8N5D0 677 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 TRIM58Q8NG06 486 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 UBA3Q8TBC4 463 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 ARHGEF26Q96DR7 871 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CALR3Q96L12 384 aaKnown RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 HNRNPABQ99729 332 aaKnown RBP23.91■■□□□ 1.42
IRF3-228ENST00000601291 LPIN3Q9BQK8 851 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms