RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SUSD6Q92537 303 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 NT5C1BQ96P26 610 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 ARID3AQ99856 593 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 FNIP2Q9P278 1114 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 SIK3Q9Y2K2 1263 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 FRYLO94915 3013 aa20.15■□□□□ 0.82
CCDC9-205ENST00000600117 MYO10Q9HD67 2058 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
CCDC9-205ENST00000600117 H7C4K7 107 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 ADAM12O43184 909 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 CLSTN1O94985 981 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 SERPINC1P01008 464 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 CNPP09543 421 aaKnown RBP20.14■□□□□ 0.81
CCDC9-205ENST00000600117 RPL17P18621 184 aaKnown RBP20.14■□□□□ 0.81
CCDC9-205ENST00000600117 CUL2Q13617 745 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 BMS1Q14692 1282 aaKnown RBP20.14■□□□□ 0.81
CCDC9-205ENST00000600117 ZNF280DQ6N043 979 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 METTL23Q86XA0 190 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 KAT5Q92993 513 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 KLHL5Q96PQ7 755 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 ERGIC2Q96RQ1 377 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 CLSTN3Q9BQT9 956 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 TLE6Q9H808 572 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 CYP3A43Q9HB55 503 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCDC9-205ENST00000600117 FBXL5Q9UKA1 691 aa20.14■□□□□ 0.81
CCDC9-205ENST00000600117 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 TEX28O15482 410 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 GALR2O43603 387 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-205ENST00000600117 HCRTO43612 131 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 WEE2P0C1S8 567 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 KLK7P49862 253 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 UBXN1Q04323 297 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 NR1I3Q14994 352 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 CTXN3Q4LDR2 81 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 ASCL5Q7RTU5 278 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 UBR7Q8N806 425 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 OR10T2Q8NGX3 314 aa20.13■□□□□ 0.81
CCDC9-205ENST00000600117 LMO2P25791 158 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 CA8P35219 290 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 LHX1P48742 406 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 GCNT1Q02742 428 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 CREMQ03060 361 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 INCA1Q0VD86 236 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 SYCP1Q15431 976 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 SLC8B1Q6J4K2 584 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 GJB7Q6PEY0 223 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 KREMEN1Q96MU8 473 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 TMEM209Q96SK2 561 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 LSM14BQ9BX40 385 aaKnown RBP20.12■□□□□ 0.81
CCDC9-205ENST00000600117 PLCB1Q9NQ66 1216 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 DDX43Q9NXZ2 648 aaKnown RBP20.12■□□□□ 0.81
CCDC9-205ENST00000600117 IFNKQ9P0W0 207 aa20.12■□□□□ 0.81
CCDC9-205ENST00000600117 AJAP1Q9UKB5 411 aaPredicted RBP20.12■□□□□ 0.81
CCDC9-205ENST00000600117 EP300Q09472 2414 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-205ENST00000600117 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 AP5Z1O43299 807 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 TBXAS1P24557 533 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-205ENST00000600117 UBASH3AP57075 661 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 RRAGAQ7L523 313 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 ERMP1Q7Z2K6 904 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 THEM5Q8N1Q8 247 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 PPM1KQ8N3J5 372 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 OR6B3Q8NGW1 331 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 WHAMMQ8TF30 809 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 RIPOR3Q96MK2 946 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 CDCA3Q99618 268 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-205ENST00000600117 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-205ENST00000600117 GANQ9H2C0 597 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 SNX25Q9H3E2 840 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 APEX2Q9UBZ4 518 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 HMGXB4Q9UGU5 601 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 CDY1Q9Y6F8 540 aa20.11■□□□□ 0.81
CCDC9-205ENST00000600117 PRR23AA6NEV1 266 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 CLASP2O75122 1294 aaKnown RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 CILPO75339 1184 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 NOL4O94818 638 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 PDGFBP01127 241 aaPredicted RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 ACO1P21399 889 aaKnown RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 ACAT1P24752 427 aaKnown RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 OR1D2P34982 312 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 GNL1P36915 607 aaPredicted RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 PBX1P40424 430 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 RAB33AQ14088 237 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 DUSP6Q16828 381 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 KLHDC7AQ5VTJ3 777 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 GLYCTKQ8IVS8 523 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 TWNKQ96RR1 684 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 PKMYT1Q99640 499 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 ACBD6Q9BR61 282 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 EMILIN2Q9BXX0 1053 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 FAM124BQ9H5Z6 455 aaPredicted RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 UBE2TQ9NPD8 197 aaPredicted RBP20.1■□□□□ 0.81
CCDC9-205ENST00000600117 CISHQ9NSE2 258 aa20.1■□□□□ 0.81
CCDC9-205ENST00000600117 A0A1W2PQC6 194 aa20.09■□□□□ 0.81
CCDC9-205ENST00000600117 PER2O15055 1255 aa20.09■□□□□ 0.81
CCDC9-205ENST00000600117 EPHB6O15197 1021 aa20.09■□□□□ 0.81
CCDC9-205ENST00000600117 PDGFRBP09619 1106 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms