RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 EFCAB6Q5THR3 1501 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 ARHGAP31Q2M1Z3 1444 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 EXOSC10Q01780 885 aaKnown RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CASKIN2Q8WXE0 1202 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 PHTF1Q9UMS5 762 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 TSC22D2O75157 780 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 SPAG6O75602 509 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 RBP3P10745 1247 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 KLRC1P26715 233 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 PTGER2P43116 358 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CENPCQ03188 943 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 MGAT5BQ3V5L5 792 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 OTOAQ7RTW8 1153 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CHSY1Q86X52 802 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 NT5C1AQ9BXI3 368 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CATSPERBQ9H7T0 1116 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 IMPAD1Q9NX62 359 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 MPP6Q9NZW5 540 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 RASSF9O75901 435 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 NUMBP49757 651 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 GALNTL6Q49A17 601 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 DENND5BQ6ZUT9 1274 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 KCTD10Q9H3F6 313 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 PPCSQ9HAB8 311 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 NFKBIL1Q9UBC1 381 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 F8W810 466 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 BNIPLQ7Z465 357 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 GPR141Q7Z602 305 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 SETD3Q86TU7 594 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 GLMNQ92990 594 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 TUBGCP3Q96CW5 907 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 WWOXQ9NZC7 414 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 HEY2Q9UBP5 337 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 HEATR9A2RTY3 570 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 STRNO43815 780 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 ZNF23P17027 643 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PSMA4P25789 261 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 RFX3P48380 749 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 LAMB3Q13751 1172 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PTK6Q13882 451 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 C10orf53Q8N6V4 93 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 JADE3Q92613 823 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 MAP3K6O95382 1288 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 TRIM25Q14258 630 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 KIRREL3Q8IZU9 778 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 LRRC71Q8N4P6 559 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 MAGEA13PA6NCF6 341 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 NCAM1P13591 858 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 ATF7IP2Q5U623 682 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 SLC44A2Q8IWA5 706 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PNPLA7Q6ZV29 1317 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PRRG1O14668 218 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PMPCBO75439 489 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PRKCEQ02156 737 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 CDC16Q13042 620 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 MTFR1Q15390 333 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 BHMTQ93088 406 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 SPATA16Q9BXB7 569 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 DYNC1LI2O43237 492 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PRIM2P49643 509 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 DDX39BQ13838 428 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 FAM117BQ6P1L5 589 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 DDHD1Q8NEL9 900 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 RAD18Q9NS91 495 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 APPL1Q9UKG1 709 aa12.3□□□□□ -0.44
SCN8A-208ENST00000599343 RUVBL2Q9Y230 463 aaKnown RBP12.3□□□□□ -0.44
SCN8A-208ENST00000599343 PDE5AO76074 875 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 ORC1Q13415 861 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 LAMC2Q13753 1193 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 ALFQ53S48 1182 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 CYB5D1Q6P9G0 228 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 C1orf131Q8NDD1 294 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 TADA1Q96BN2 335 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 GTF2A1LQ9UNN4 478 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms