RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 C1orf228Q6PIY5 440 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 OSTM1Q86WC4 334 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 CMTM8Q8IZV2 173 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 SPPL2BQ8TCT7 592 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 C2orf15Q8WU43 125 aaKnown RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 USP13Q92995 863 aaPredicted RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 SECISBP2LQ93073 1101 aaKnown RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 ZNF560Q96MR9 790 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 GCNAQ96QF7 691 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 PI4K2AQ9BTU6 479 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 SIX4Q9UIU6 781 aa15.81■□□□□ 0.12
IRF3-223ENST00000599223 CDV3Q9UKY7 258 aaKnown RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 SRPRBQ9Y5M8 271 aaKnown RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.81■□□□□ 0.12
IRF3-223ENST00000599223 ACACBO00763 2458 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 LAMA1P25391 3075 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 FRMD3A2A2Y4 597 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 EXTL3O43909 919 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 GCNT3O95395 438 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 F11P03951 625 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 ARSAP15289 507 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 POU5F1Q01860 360 aaKnown RBP15.8■□□□□ 0.12
IRF3-223ENST00000599223 SIM2Q14190 667 aaPredicted RBP15.8■□□□□ 0.12
IRF3-223ENST00000599223 TXNDC8Q6A555 127 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 FSTL4Q6MZW2 842 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 THEM5Q8N1Q8 247 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 GPR161Q8N6U8 529 aaKnown RBP15.8■□□□□ 0.12
IRF3-223ENST00000599223 CELF5Q8N6W0 485 aaKnown RBP15.8■□□□□ 0.12
IRF3-223ENST00000599223 MAB21L3Q8N8X9 362 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 FAM83CQ9BQN1 747 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 MTMR12Q9C0I1 747 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 RBAKQ9NYW8 714 aaPredicted RBP15.8■□□□□ 0.12
IRF3-223ENST00000599223 AGAP1Q9UPQ3 857 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 PCDHB5Q9Y5E4 795 aa15.8■□□□□ 0.12
IRF3-223ENST00000599223 CACNA1BQ00975 2339 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 DCDC2BA2VCK2 349 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 GAP43P17677 238 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 BFSP1Q12934 665 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 ITPRIPL2Q3MIP1 535 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 DGKKQ5KSL6 1271 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 RRAGBQ5VZM2 374 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 NT5DC4Q86YG4 428 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 HSCBQ8IWL3 235 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 LEO1Q8WVC0 666 aaPredicted RBP15.79■□□□□ 0.12
IRF3-223ENST00000599223 ACCSQ96QU6 501 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 USP28Q96RU2 1077 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 EBF3Q9H4W6 596 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 GKN1Q9NS71 199 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 POLR3BQ9NW08 1133 aaPredicted RBP15.79■□□□□ 0.12
IRF3-223ENST00000599223 DDX43Q9NXZ2 648 aaKnown RBP15.79■□□□□ 0.12
IRF3-223ENST00000599223 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 RAB23Q9ULC3 237 aa15.79■□□□□ 0.12
IRF3-223ENST00000599223 MAGED2Q9UNF1 606 aaPredicted RBP15.79■□□□□ 0.12
IRF3-223ENST00000599223 TULP1O00294 542 aaPredicted RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 PRPF40AO75400 957 aaKnown RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 IDEP14735 1019 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 SYT1P21579 422 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 CYP2F1P24903 491 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 PNPLA4P41247 253 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 PXNP49023 591 aaPredicted RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 TSPY1Q01534 308 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 SMARCB1Q12824 385 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 POSTNQ15063 836 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 TAF12Q16514 161 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 DDR2Q16832 855 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 INTS6LQ5JSJ4 861 aaKnown RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 SV2BQ7L1I2 683 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 LONP2Q86WA8 852 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 DCP1BQ8IZD4 617 aaKnown RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 FAM160A2Q8N612 972 aaPredicted RBP15.78■□□□□ 0.12
IRF3-223ENST00000599223 HPS3Q969F9 1004 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 SLC22A12Q96S37 553 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 PCIF1Q9H4Z3 704 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 PDE11AQ9HCR9 933 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 EXOC7Q9UPT5 735 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 CHD8Q9HCK8 2581 aa15.78■□□□□ 0.12
IRF3-223ENST00000599223 KMT2BQ9UMN6 2715 aaPredicted RBP15.77■□□□□ 0.12
IRF3-223ENST00000599223 CNOT1A5YKK6 2376 aaKnown RBP15.77■□□□□ 0.12
IRF3-223ENST00000599223 PRR5-ARHGAP8B1AHC4 643 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 NOL4O94818 638 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 PRPF6O94906 941 aaKnown RBP15.77■□□□□ 0.12
IRF3-223ENST00000599223 RETP07949 1114 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 GARTP22102 1010 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 AVPR1AP37288 418 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 STAT6P42226 847 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 ARHGAP8P85298 464 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 RUNX3Q13761 415 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 TMEM196Q5HYL7 178 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.77■□□□□ 0.12
IRF3-223ENST00000599223 ADGRF2Q8IZF7 708 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 LRRC52Q8N7C0 313 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 NOC3LQ8WTT2 800 aaKnown RBP15.77■□□□□ 0.12
IRF3-223ENST00000599223 PANK2Q9BZ23 570 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 FBRSL1Q9HCM7 1045 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms