RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 CRELD2Q6UXH1 353 aaPredicted RBP18.77■□□□□ 0.6
HOMER3-210ENST00000599097 TMEM130Q8N3G9 435 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 TOP6BLQ8N6T0 577 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 FUBP3Q96I24 572 aaKnown RBP eCLIP18.77■□□□□ 0.6
HOMER3-210ENST00000599097 CEP295NLQ96MC4 621 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 TDP1Q9NUW8 608 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 GDAP2Q9NXN4 497 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 GTSE1Q9NYZ3 720 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 EHD2Q9NZN4 543 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 AGAP1Q9UPQ3 857 aa18.77■□□□□ 0.6
HOMER3-210ENST00000599097 NCANO14594 1321 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 SCN1AP35498 2009 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 MYMKA6NI61 221 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 NLRP12P59046 1061 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 AMPD3Q01432 767 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 CCINQ13939 588 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 ZNF268Q14587 947 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-210ENST00000599097 PON2Q15165 354 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 PDGFRLQ15198 375 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 C4orf50Q6ZRC1 276 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 CEP68Q76N32 757 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 DPH6Q7L8W6 267 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 PDCL2Q8N4E4 241 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 CSGALNACT2Q8N6G5 542 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 NETO1Q8TDF5 533 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 DNAJC19Q96DA6 116 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 TRMT2BQ96GJ1 504 aaKnown RBP18.76■□□□□ 0.59
HOMER3-210ENST00000599097 IL21Q9HBE4 155 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
HOMER3-210ENST00000599097 DDX43Q9NXZ2 648 aaKnown RBP18.76■□□□□ 0.59
HOMER3-210ENST00000599097 DCHS1Q96JQ0 3298 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 CCDC163A0A0D9SF12 145 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 FRMD3A2A2Y4 597 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 TNNC2P02585 160 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 KRT19P08727 400 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 PDIA4P13667 645 aaKnown RBP18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SOX9P48436 509 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 RUNX3Q13761 415 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 CFAP221Q4G0U5 840 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 FBXO43Q4G163 708 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 INTS6LQ5JSJ4 861 aaKnown RBP18.75■□□□□ 0.59
HOMER3-210ENST00000599097 USP49Q70CQ1 688 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 MON1AQ86VX9 555 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SPATA2LQ8IUW3 424 aaPredicted RBP18.75■□□□□ 0.59
HOMER3-210ENST00000599097 ADGRF2Q8IZF7 708 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 GPD1LQ8N335 351 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 CPA6Q8N4T0 437 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 MAB21L3Q8N8X9 362 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 C1orf127Q8N9H9 656 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SAAL1Q96ER3 474 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 ZFYVE19Q96K21 471 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SLC46A2Q9BY10 475 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 TBC1D7Q9P0N9 293 aa18.75■□□□□ 0.59
HOMER3-210ENST00000599097 MAGED2Q9UNF1 606 aaPredicted RBP18.75■□□□□ 0.59
HOMER3-210ENST00000599097 SYT1P21579 422 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 CEBPZQ03701 1054 aaKnown RBP18.74■□□□□ 0.59
HOMER3-210ENST00000599097 RESTQ13127 1097 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 LRRTM3Q86VH5 581 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 WDR5BQ86VZ2 330 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 DDX1Q92499 740 aaKnown RBP18.74■□□□□ 0.59
HOMER3-210ENST00000599097 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 GKN1Q9NS71 199 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 RBM12Q9NTZ6 932 aaKnown RBP18.74■□□□□ 0.59
HOMER3-210ENST00000599097 L1RE1Q9UN81 338 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 SNX9Q9Y5X1 595 aa18.74■□□□□ 0.59
HOMER3-210ENST00000599097 TRAV19A0A0A6YYK7 116 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 CHURC1-FNTBB4DL54 471 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 F11P03951 625 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 USP17L7P0C7H9 530 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 PFKLP17858 780 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 DRD1P21728 446 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 FNTBP49356 437 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 NR1H3Q13133 447 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 STK38Q15208 465 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 TXNDC11Q6PKC3 985 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 MYRFLQ96LU7 910 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 SLC8A2Q9UPR5 921 aa18.73■□□□□ 0.59
HOMER3-210ENST00000599097 MED19A0JLT2 244 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-210ENST00000599097 K7ESF4 209 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 TRDMT1O14717 391 aaKnown RBP18.72■□□□□ 0.59
HOMER3-210ENST00000599097 EIF3DO15371 548 aaKnown RBP eCLIP18.72■□□□□ 0.59
HOMER3-210ENST00000599097 NOL4O94818 638 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 HMGA1P17096 107 aaKnown RBP18.72■□□□□ 0.59
HOMER3-210ENST00000599097 MAGEA11P43364 429 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 TNK2Q07912 1038 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 KCNA1Q09470 495 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 GAS6Q14393 721 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 KCNB1Q14721 858 aa18.72■□□□□ 0.59
HOMER3-210ENST00000599097 CSRP2Q16527 193 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms