RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 MTRRQ9UBK8 725 aa20.51■□□□□ 0.87
LTBP4-223ENST00000598717 TNRC18O15417 2968 aaPredicted RBP20.5■□□□□ 0.87
LTBP4-223ENST00000598717 NLRC5Q86WI3 1866 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 GRM6O15303 877 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 LPXNO60711 386 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 CXCL14O95715 111 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 BRD2P25440 801 aaKnown RBP20.5■□□□□ 0.87
LTBP4-223ENST00000598717 ARPP19P56211 112 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 STILQ15468 1287 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 MEA1Q16626 185 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 MDH1BQ5I0G3 518 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 TAF3Q5VWG9 929 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 CYP26C1Q6V0L0 522 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 NOP9Q86U38 636 aaKnown RBP20.5■□□□□ 0.87
LTBP4-223ENST00000598717 VPS36Q86VN1 386 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 C12orf29Q8N999 325 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 MICAL1Q8TDZ2 1067 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 ZNF606Q8WXB4 792 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 AUTS2Q8WXX7 1259 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 TMEM209Q96SK2 561 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 BAG1Q99933 345 aaPredicted RBP20.5■□□□□ 0.87
LTBP4-223ENST00000598717 ZCWPW1Q9H0M4 648 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 CRTAC1Q9NQ79 661 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 FAM49BQ9NUQ9 324 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 GTF3C4Q9UKN8 822 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 CDY1Q9Y6F8 540 aa20.5■□□□□ 0.87
LTBP4-223ENST00000598717 TSC2P49815 1807 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 MYBPHLA2RUH7 354 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 TBC1D4O60343 1298 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 CPB1P15086 417 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 TNFAIP3P21580 790 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 CDK17Q00537 523 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 SMC1AQ14683 1233 aaKnown RBP20.49■□□□□ 0.87
LTBP4-223ENST00000598717 PTPN14Q15678 1187 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 SLC39A12Q504Y0 691 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 HGSNATQ68CP4 663 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 FAM171BQ6P995 826 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 TMTC1Q8IUR5 882 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 LRRC8AQ8IWT6 810 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 MYCBPAPQ8TBZ2 947 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 TFAP2BQ92481 460 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 CYFIP2Q96F07 1278 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 AGPAT1Q99943 283 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 LPIN3Q9BQK8 851 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 MED10Q9BTT4 135 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 DEF6Q9H4E7 631 aa20.49■□□□□ 0.87
LTBP4-223ENST00000598717 NGRNQ9NPE2 291 aaKnown RBP20.49■□□□□ 0.87
LTBP4-223ENST00000598717 SEPT11Q9NVA2 429 aaKnown RBP20.49■□□□□ 0.87
LTBP4-223ENST00000598717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CSPG5O95196 566 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 OR4Q2P0C623 313 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 RPL17P18621 184 aaKnown RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 OR1D2P34982 312 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 ERVFC1P60507 584 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CDR2Q01850 454 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CYP27A1Q02318 531 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CNGA2Q16280 664 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 NFE2Q16621 373 aaPredicted RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 PPP1R26Q5T8A7 1209 aaPredicted RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 ARHGAP17Q68EM7 881 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 PDE12Q6L8Q7 609 aaKnown RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 C4orf50Q6ZRC1 276 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CCDC112Q8NEF3 446 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 SLC20A1Q8WUM9 679 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CCDC42Q96M95 316 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 CHP1Q99653 195 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 FNIP2Q9P278 1114 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 ARHGAP20Q9P2F6 1191 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 HESX1Q9UBX0 185 aa20.48■□□□□ 0.87
LTBP4-223ENST00000598717 NOCTQ9UK39 431 aaKnown RBP20.48■□□□□ 0.87
LTBP4-223ENST00000598717 VWA8A3KMH1 1905 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 SSU72P8A0A1W2PR75 194 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 O00370 1275 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 MMEP08473 750 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 PLEKP08567 350 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 CCDC130P13994 396 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 DNAJB1P25685 340 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 ADORA2BP29275 332 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 EIF4A3P38919 411 aaKnown RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 SMARCB1Q12824 385 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 GPR17Q13304 367 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 PLPP4Q5VZY2 271 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 SLC8B1Q6J4K2 584 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 RSPO2Q6UXX9 243 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 ZNF571Q7Z3V5 609 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 LRRTM3Q86VH5 581 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 SPATA2LQ8IUW3 424 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 GLYCTKQ8IVS8 523 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 SLC2A14Q8TDB8 520 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 DDX1Q92499 740 aaKnown RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 MYLPFQ96A32 169 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 PCED1BQ96HM7 432 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 PKMYT1Q99640 499 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 HNRNPABQ99729 332 aaKnown RBP20.47■□□□□ 0.87
LTBP4-223ENST00000598717 CLSTN3Q9BQT9 956 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 ZSWIM1Q9BR11 485 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 LMAN2LQ9H0V9 348 aa20.47■□□□□ 0.87
LTBP4-223ENST00000598717 NHEJ1Q9H9Q4 299 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms