RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 ATICP31939 592 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 CCR2P41597 374 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 GCLMP48507 274 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 GPC5P78333 572 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 PAK1Q13153 545 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 GPR17Q13304 367 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
XRCC1-206ENST00000597811 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 ELMOD1Q8N336 334 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 TOP6BLQ8N6T0 577 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 CCDC150Q8NCX0 1101 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 CXorf38Q8TB03 319 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 MCRS1Q96EZ8 462 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 KXD1Q9BQD3 176 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-206ENST00000597811 SNX25Q9H3E2 840 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■■■■ 70.2
XRCC1-206ENST00000597811 FAM86C1Q9NVL1 165 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
XRCC1-206ENST00000597811 H0Y858 1186 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 IKBKBO14920 756 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
XRCC1-206ENST00000597811 STX10O60499 249 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.24
XRCC1-206ENST00000597811 ACAT1P24752 427 aaKnown RBP16.52■□□□□ 0.24
XRCC1-206ENST00000597811 LHX1P48742 406 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 MRE11P49959 708 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 DUSP4Q13115 394 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 ZNF667Q5HYK9 610 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 SV2AQ7L0J3 742 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 HS6ST3Q8IZP7 471 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 OR10T2Q8NGX3 314 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 FAM200AQ8TCP9 573 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 ARHGEF3Q9NR81 526 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 GDE1Q9NZC3 331 aa16.52■□□□□ 0.24
XRCC1-206ENST00000597811 ARMCX3Q9UH62 379 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-206ENST00000597811 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
XRCC1-206ENST00000597811 TICRRQ7Z2Z1 1910 aa16.52■□□□□ 0.23
XRCC1-206ENST00000597811 NUP210Q8TEM1 1887 aaPredicted RBP16.52■□□□□ 0.23
XRCC1-206ENST00000597811 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 OBSL1O75147 1896 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 MTMR11A4FU01 709 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 MOSPD3O75425 235 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 P4HA1P13674 534 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 PCSK1P29120 753 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 CLDN10P78369 228 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-206ENST00000597811 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 SGSM1Q2NKQ1 1148 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 SCARA5Q6ZMJ2 495 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-206ENST00000597811 TTC9BQ8N6N2 239 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ATAD1Q8NBU5 361 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ZNF512Q96ME7 567 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-206ENST00000597811 SEPT5Q99719 369 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-206ENST00000597811 RTP3Q9BQQ7 232 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ZCWPW1Q9H0M4 648 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 TBC1D17Q9HA65 648 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 ABI2Q9NYB9 513 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-206ENST00000597811 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 F5P12259 2224 aa16.51■□□□□ 0.23
XRCC1-206ENST00000597811 COL4A2P08572 1712 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ZNF638Q14966 1978 aaKnown RBP16.5■□□□□ 0.23
XRCC1-206ENST00000597811 RIF1Q5UIP0 2472 aaKnown RBP16.5■□□□□ 0.23
XRCC1-206ENST00000597811 STK25O00506 426 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ZNF197O14709 1029 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 VNN1O95497 513 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
XRCC1-206ENST00000597811 MBD3O95983 291 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 PDGFRBP09619 1106 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 GJA1P17302 382 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 EPHA5P54756 1037 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 TAF12Q16514 161 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ZACNQ401N2 412 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 CYP4A22Q5TCH4 519 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 MLKLQ8NB16 471 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ACBD6Q9BR61 282 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 PLA2G2FQ9BZM2 168 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
XRCC1-206ENST00000597811 TMEM8AQ9HCN3 771 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
XRCC1-206ENST00000597811 ECI2O75521 394 aa16.49■□□□□ 0.23
XRCC1-206ENST00000597811 SOAT2O75908 522 aa16.49■□□□□ 0.23
XRCC1-206ENST00000597811 MICAL2O94851 1124 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms