RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 DUSP12Q9UNI6 340 aa22.57■■□□□ 1.2
PNKP-209ENST00000596726 MYBPHLA2RUH7 354 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 TRIM49BA6NDI0 452 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 PPP1R3GB7ZBB8 358 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 GNL1P36915 607 aaPredicted RBP22.56■■□□□ 1.2
PNKP-209ENST00000596726 FKBP3Q00688 224 aaKnown RBP22.56■■□□□ 1.2
PNKP-209ENST00000596726 STIM1Q13586 685 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 CCDC142Q17RM4 750 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 SGSM1Q2NKQ1 1148 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 ZNF699Q32M78 642 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 PARM1Q6UWI2 310 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 FGF14Q92915 247 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 MCRS1Q96EZ8 462 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 SYT15Q9BQS2 421 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 NUMBLQ9Y6R0 609 aa22.56■■□□□ 1.2
PNKP-209ENST00000596726 DENND4CQ5VZ89 1909 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 PSMA7O14818 248 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 ATP2C2O75185 946 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 HLA-DRAP01903 254 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 EPB41P11171 864 aaKnown RBP22.55■■□□□ 1.2
PNKP-209ENST00000596726 MYL4P12829 197 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 CFAP221Q4G0U5 840 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 ZNF667Q5HYK9 610 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 MTSS1LQ765P7 747 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 ITIH5Q86UX2 942 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 TAF4BQ92750 862 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 FUBP3Q96I24 572 aaKnown RBP eCLIP22.55■■□□□ 1.2
PNKP-209ENST00000596726 LPIN3Q9BQK8 851 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 PI4K2AQ9BTU6 479 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 RPP25Q9BUL9 199 aaKnown RBP22.55■■□□□ 1.2
PNKP-209ENST00000596726 SNX25Q9H3E2 840 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 ZNF334Q9HCZ1 680 aaPredicted RBP22.55■■□□□ 1.2
PNKP-209ENST00000596726 CRTAC1Q9NQ79 661 aa22.55■■□□□ 1.2
PNKP-209ENST00000596726 SLC16A3O15427 465 aaKnown RBP22.54■■□□□ 1.2
PNKP-209ENST00000596726 ASS1P00966 412 aaKnown RBP22.54■■□□□ 1.2
PNKP-209ENST00000596726 PDGFRBP09619 1106 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 GTF2H1P32780 548 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 GCLMP48507 274 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 FOXR2Q6PJQ5 311 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 HFE2Q6ZVN8 426 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 OR6B3Q8NGW1 331 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 SHKBP1Q8TBC3 707 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 ELMO3Q96BJ8 720 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 IPO9Q96P70 1041 aaKnown RBP22.54■■□□□ 1.2
PNKP-209ENST00000596726 TMEM8AQ9HCN3 771 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 KIAA1468Q9P260 1216 aa22.54■■□□□ 1.2
PNKP-209ENST00000596726 GREB1Q4ZG55 1949 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 BIN1O00499 593 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 NARSO43776 548 aaKnown RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 CYP2F1P24903 491 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 CDH8P55286 799 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 PSMC1P62191 440 aaKnown RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 VEPH1Q14D04 833 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 MAPRE1Q15691 268 aaKnown RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 SPATA2LQ8IUW3 424 aaPredicted RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 TRIML1Q8N9V2 468 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 ST13P5Q8NFI4 369 aaPredicted RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 TAS1R2Q8TE23 839 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 GIPC2Q8TF65 315 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 DUSP9Q99956 384 aaKnown RBP22.53■■□□□ 1.2
PNKP-209ENST00000596726 SDCBP2Q9H190 292 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 SMYD3Q9H7B4 428 aa22.53■■□□□ 1.2
PNKP-209ENST00000596726 GJA1P17302 382 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 PIK3CAP42336 1068 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 MAGEA11P43364 429 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 GPR15P49685 360 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 CAMK4Q16566 473 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 TTI2Q6NXR4 508 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 C4orf50Q6ZRC1 276 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 GAREM2Q75VX8 874 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 MYCBPAPQ8TBZ2 947 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 FAM200AQ8TCP9 573 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 MYLPFQ96A32 169 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 ZSWIM3Q96MP5 696 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 IL21Q9HBE4 155 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 LMBRD1Q9NUN5 540 aa22.52■■□□□ 1.2
PNKP-209ENST00000596726 OBSL1O75147 1896 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 A0A1W2PRU2 124 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 FGF19O95750 216 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 SRFP11831 508 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 P4HA1P13674 534 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 HMGA1P17096 107 aaKnown RBP22.51■■□□□ 1.19
PNKP-209ENST00000596726 PTPN1P18031 435 aaKnown RBP22.51■■□□□ 1.19
PNKP-209ENST00000596726 RAP1GAPP47736 663 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 RPL10AP62906 217 aaKnown RBP22.51■■□□□ 1.19
PNKP-209ENST00000596726 TEAD2Q15562 447 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 KRT39Q6A163 491 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 SPOPLQ6IQ16 392 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 FILIP1Q7Z7B0 1213 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 GPR152Q8TDT2 470 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 NELFBQ8WX92 580 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 PBXIP1Q96AQ6 731 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 PCED1BQ96HM7 432 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 CEP63Q96MT8 703 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 ASB16Q96NS5 453 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 GPR88Q9GZN0 384 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 DPEP3Q9H4B8 488 aa22.51■■□□□ 1.19
PNKP-209ENST00000596726 MAGEC2Q9UBF1 373 aaPredicted RBP22.51■■□□□ 1.19
PNKP-209ENST00000596726 ZNF318Q5VUA4 2279 aa22.5■■□□□ 1.19
PNKP-209ENST00000596726 A8MXQ7 604 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms