RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 SMARCB1Q12824 385 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 NFE2Q16621 373 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 SLC5A9Q2M3M2 681 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 PABPC1LQ4VXU2 614 aaKnown RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 GET4Q7L5D6 327 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 ITFG1Q8TB96 612 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 SPPL2BQ8TCT7 592 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 C2orf15Q8WU43 125 aaKnown RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 SEPT5Q99719 369 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-204ENST00000596348 IMPG2Q9BZV3 1241 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 RAB20Q9NX57 234 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 HMGXB4Q9UGU5 601 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 NR2E1Q9Y466 385 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 PCDHB5Q9Y5E4 795 aa16.01■□□□□ 0.15
SCN1B-204ENST00000596348 TNFRSF10AO00220 468 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 GNA14O95837 355 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 FSHRP23945 695 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 CYP2F1P24903 491 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 ERCC5P28715 1186 aaPredicted RBP16■□□□□ 0.15
SCN1B-204ENST00000596348 CCR2P41597 374 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 GPR15P49685 360 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 MGAT5BQ3V5L5 792 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 OTOP3Q7RTS5 596 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 RNF135Q8IUD6 432 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 HS6ST3Q8IZP7 471 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 TDRD5Q8NAT2 981 aaKnown RBP16■□□□□ 0.15
SCN1B-204ENST00000596348 MYLPFQ96A32 169 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 CNOT6LQ96LI5 555 aaKnown RBP16■□□□□ 0.15
SCN1B-204ENST00000596348 CORO1BQ9BR76 489 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 ABCB6Q9NP58 842 aa16■□□□□ 0.15
SCN1B-204ENST00000596348 A8MXQ7 604 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 P4HA1P13674 534 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 PTPN2P17706 415 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 PTPN1P18031 435 aaKnown RBP15.99■□□□□ 0.15
SCN1B-204ENST00000596348 ALDH1A3P47895 512 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 TUFMP49411 452 aaKnown RBP15.99■□□□□ 0.15
SCN1B-204ENST00000596348 PLD1Q13393 1074 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 ORC1Q13415 861 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 PRSS36Q5K4E3 855 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 POTEHQ6S545 545 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 TMC8Q8IU68 726 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 ZDHHC14Q8IZN3 488 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 GPR152Q8TDT2 470 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 ING5Q8WYH8 240 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 TATDN2Q93075 761 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 TCEAL4Q96EI5 215 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 PCED1BQ96HM7 432 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 ARID3AQ99856 593 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 LRRC3Q9BY71 257 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 AVENQ9NQS1 362 aaPredicted RBP15.99■□□□□ 0.15
SCN1B-204ENST00000596348 DACH1Q9UI36 760 aa15.99■□□□□ 0.15
SCN1B-204ENST00000596348 GREB1Q4ZG55 1949 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 PMM2O15305 246 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 MOSPD3O75425 235 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 TECTAO75443 2155 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 FGFR1OPO95684 399 aaKnown RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 CEBPBP17676 345 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 NDST1P52848 882 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 EPHB3P54753 998 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 EPHA5P54756 1037 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 INCA1Q0VD86 236 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 KCNH2Q12809 1159 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 SDHAF4Q5VUM1 108 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 NPAS3Q8IXF0 933 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 ELMOD1Q8N336 334 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 GIPC2Q8TF65 315 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 FGF13Q92913 245 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 PSMG2Q969U7 264 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 ACSF2Q96CM8 615 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 FUBP3Q96I24 572 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 ZNF512Q96ME7 567 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 TWNKQ96RR1 684 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 CYP3A43Q9HB55 503 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 ZNF334Q9HCZ1 680 aaPredicted RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 LIMD1Q9UGP4 676 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 MUTYHQ9UIF7 546 aa15.98■□□□□ 0.15
SCN1B-204ENST00000596348 MRPS23Q9Y3D9 190 aaKnown RBP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCN1B-204ENST00000596348 ASGR2P07307 311 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 CD58P19256 250 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 BDNFP23560 247 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 MAGEA11P43364 429 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 MAPRE1Q15691 268 aaKnown RBP15.97■□□□□ 0.15
SCN1B-204ENST00000596348 DDR2Q16832 855 aa15.97■□□□□ 0.15
SCN1B-204ENST00000596348 IQCEQ6IPM2 695 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms