RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 DNAI2Q9GZS0 605 aa15.65■□□□□ 0.1
SHKBP1-211ENST00000595945 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
SHKBP1-211ENST00000595945 CDH9Q9ULB4 789 aa15.65■□□□□ 0.1
SHKBP1-211ENST00000595945 PATJQ8NI35 1801 aa15.65■□□□□ 0.1
SHKBP1-211ENST00000595945 A0A0A6YYK5 440 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 KRT86O43790 486 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 OAZ2O95190 189 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 GJB5O95377 273 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 PTPN1P18031 435 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 SSTR3P32745 418 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 FUT10Q6P4F1 479 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 MON1BQ7L1V2 547 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 TMEM173Q86WV6 379 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 PASD1Q8IV76 773 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 RNF168Q8IYW5 571 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 MCOLN2Q8IZK6 566 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 B3GALNT2Q8NCR0 500 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 TMEM35BQ8NCS4 154 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 C1orf131Q8NDD1 294 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC9A7Q96T83 725 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 PKMYT1Q99640 499 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 ACBD6Q9BR61 282 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 GPR62Q9BZJ7 368 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 PDCL3Q9H2J4 239 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 CRTAC1Q9NQ79 661 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 SALL4Q9UJQ4 1053 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 TSPAN16Q9UKR8 245 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 DUSP10Q9Y6W6 482 aa15.64■□□□□ 0.09
SHKBP1-211ENST00000595945 CARNS1A5YM72 827 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 CCDC85CA6NKD9 419 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 ATP2C2O75185 946 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 LINC00271P0C7V0 271 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 ACAT1P24752 427 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 PCSK1P29120 753 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 TKTP29401 623 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 GPD2P43304 727 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 ELAVL2Q12926 359 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 MRPL58Q14197 206 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 BTG3Q14201 252 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 GOLGA7BQ2TAP0 167 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 OVOS1Q6IE37 1185 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM171BQ6P995 826 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 PAQR9Q6ZVX9 377 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 PHOSPHO2Q8TCD6 241 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 DPF3Q92784 378 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 VCPIP1Q96JH7 1222 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 HNRNPABQ99729 332 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 THAP2Q9H0W7 228 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 RRAGDQ9NQL2 400 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 FAM49BQ9NUQ9 324 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 CYTH4Q9UIA0 394 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 GTF3C4Q9UKN8 822 aa15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 MRPL42Q9Y6G3 142 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 SF3B1O75533 1304 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHKBP1-211ENST00000595945 NT5C1B-RDH14C9J2C7 533 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 M0QYV0 167 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 CAPN15O75808 1086 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 CYP1A2P05177 515 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 MYBL1P10243 752 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 CCDC130P13994 396 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 LAG3P18627 525 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 MMP8P22894 467 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 PBX3P40426 434 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 NSFP46459 744 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 ALDH7A1P49419 539 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 PSMC1P62191 440 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 GPC5P78333 572 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 PTPN14Q15678 1187 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 CCDC142Q17RM4 750 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 INTS6LQ5JSJ4 861 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 KCNT2Q6UVM3 1135 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 TTC30AQ86WT1 665 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 FUKQ8N0W3 1084 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 SLC39A11Q8N1S5 342 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 RNF10Q8N5U6 811 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 COLGALT1Q8NBJ5 622 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 OR10T2Q8NGX3 314 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 CTNNBL1Q8WYA6 563 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 ARHGEF26Q96DR7 871 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 IGSF21Q96ID5 467 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 ZNF558Q96NG5 402 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 LBHD1Q9BQE6 289 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 VN1R3Q9BXE9 311 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 AVENQ9NQS1 362 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 MYO1AQ9UBC5 1043 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 GUCA1BQ9UMX6 200 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 PLXNA4Q9HCM2 1894 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
SHKBP1-211ENST00000595945 MYBPHLA2RUH7 354 aa15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 KIF2AO00139 706 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-211ENST00000595945 TBC1D4O60343 1298 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms