RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 PPP1R12CQ9BZL4 782 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 C17orf75Q9HAS0 396 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 APOBEC3GQ9HC16 384 aaKnown RBP18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 RAVER2Q9HCJ3 691 aaKnown RBP18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 SSU72Q9NP77 194 aaKnown RBP18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 FBXO6Q9NRD1 293 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 GABBR1Q9UBS5 961 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 hCG_1818297A0A087WSY0 165 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 ABLIM1O14639 778 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 TM9SF1O15321 606 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 KRT36O76013 467 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 ITGAVP06756 1048 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 SKIP12755 728 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 WNT7BP56706 349 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 NLRP11P59045 1033 aaKnown RBP18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 RCN2Q14257 317 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 CMPK2Q5EBM0 449 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 PCGF5Q86SE9 256 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 FBXO36Q8NEA4 188 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZNF333Q96JL9 665 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 VPS11Q9H270 941 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 IKBKGQ9Y6K9 419 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 EP400Q96L91 3159 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 TMEM191CA6NGB0 347 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 GSC2O15499 205 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 LPXNO60711 386 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZBED4O75132 1171 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 MT-ND3P03897 115 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 C4BPAP04003 597 aaKnown RBP18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 ESRRAP11474 423 aaPredicted RBP18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 RPS6P62753 249 aaKnown RBP18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZRSR2Q15696 482 aaKnown RBP18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 ANKRD22Q5VYY1 191 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 PPIL6Q8IXY8 311 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 SAMD3Q8N6K7 520 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 PTPRN2Q92932 1015 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 RMDN3Q96TC7 470 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 DEFB129Q9H1M3 183 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 PCDHA10Q9Y5I2 948 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 LY75O60449 1722 aa18.27■□□□□ 0.51
ARHGEF1-213ENST00000595897 PSMD6Q15008 389 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 PGM5Q15124 567 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 MSS51Q4VC12 460 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 FNBP1LQ5T0N5 605 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ADGRD1Q6QNK2 874 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZC3H18Q86VM9 953 aaKnown RBP18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 TEKT4Q8WW24 435 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZNF606Q8WXB4 792 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 SCG3Q8WXD2 468 aaKnown RBP18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 NKD2Q969F2 451 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 TTC17Q96AE7 1141 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ALKBH8Q96BT7 664 aaKnown RBP18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 GINM1Q9NU53 330 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 AGO2Q9UKV8 859 aaKnown RBP18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 VNN1O95497 513 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 MMP8P22894 467 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 PTGER2P43116 358 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 CCDC142Q17RM4 750 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ACSBG2Q5FVE4 666 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 AP1ARQ63HQ0 302 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 PPP1R2P3Q6NXS1 205 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 PPFIBP2Q8ND30 876 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 UCMAQ8WVF2 138 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 TMEM120AQ9BXJ8 343 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 ACSS3Q9H6R3 686 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 LRCH1Q9Y2L9 728 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 NFASCO94856 1347 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 PTPRJQ12913 1337 aa18.26■□□□□ 0.51
ARHGEF1-213ENST00000595897 RFC5P40937 340 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 LBRQ14739 615 aaKnown RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 BANPQ8N9N5 519 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 PAPOLBQ9NRJ5 636 aaKnown RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 RBAKQ9NYW8 714 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 SCOCQ9UIL1 159 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 FESP07332 822 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 CDKN2BP42772 138 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZNF252P-AS1Q0IIN9 211 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZNF394Q53GI3 561 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 LRRC38Q5VT99 294 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 ARHGEF16Q5VV41 709 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 PDIK1LQ8N165 341 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 PDCD7Q8N8D1 485 aaKnown RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 MCPH1Q8NEM0 835 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 ACTL9Q8TC94 416 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 CPT1BQ92523 772 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 NUB1Q9Y5A7 615 aa18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 CTDP1Q9Y5B0 961 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-213ENST00000595897 AHCYL1O43865 530 aa18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 CALB1P05937 261 aa18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 GNAT1P11488 350 aa18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 TBXAS1P24557 533 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 GDF10P55107 478 aa18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 SMTNL2Q2TAL5 461 aa18.24■□□□□ 0.51
ARHGEF1-213ENST00000595897 IRGCQ6NXR0 463 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms