RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CXCL8P10145 99 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 HNRNPLP14866 589 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 RPA1P27694 616 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 AARSP49588 968 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 HMGN5P82970 282 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 MYBPC2Q14324 1141 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 VEPH1Q14D04 833 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 TAF12Q16514 161 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 SLC39A12Q504Y0 691 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 ARMCX5Q6P1M9 558 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 C11orf74Q86VG3 221 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 PNPLA1Q8N8W4 532 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 CAMK1GQ96NX5 476 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 PHLPP2Q6ZVD8 1323 aa14.91□□□□□ -0.02
SHKBP1-208ENST00000595726 H0Y626 953 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 MAP3K13O43283 966 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 TRIM16O95361 564 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 CD2BP2O95400 341 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 F11P03951 625 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 CFIP05156 583 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 ITPKAP23677 461 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 LRPAP1P30533 357 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 MCM7P33993 719 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 RDXP35241 583 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 NLRP12P59046 1061 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 GUCY1B3Q02153 619 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 DMP1Q13316 513 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 PDGFRLQ15198 375 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 ZBTB6Q15916 424 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 TMEM92Q6UXU6 159 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 LPCAT2Q7L5N7 544 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 SYT12Q8IV01 421 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 DAW1Q8N136 415 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 CPA6Q8N4T0 437 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 DEFB119Q8N690 84 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 MDM1Q8TC05 714 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 ADAM32Q8TC27 787 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 USP33Q8TEY7 942 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 DUS2Q9NX74 493 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 ANKFY1Q9P2R3 1169 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 RAXQ9Y2V3 346 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 ACACAQ13085 2346 aa14.9□□□□□ -0.02
SHKBP1-208ENST00000595726 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 SFI1A8K8P3 1242 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 UPK3BL1B0FP48 263 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 UPK3BL2E5RIL1 263 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 K7EQS6 105 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 TNFRSF10BO14763 440 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 P2RY2P41231 377 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 TUFMP49411 452 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 LRRTM3Q86VH5 581 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 OLIG1Q8TAK6 271 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 SENP8Q96LD8 212 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 CYP2S1Q96SQ9 504 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 HAPLN2Q9GZV7 340 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 LINC00597Q9H2U6 94 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 CCDC86Q9H6F5 360 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 ARHGAP28Q9P2N2 729 aa14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-208ENST00000595726 CYSRT1A8MQ03 144 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 SLC16A4O15374 487 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 PRB1P04280 392 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 CD59P13987 128 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 TYMPP19971 482 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 GPR15P49685 360 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 ATXN3P54252 364 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 MTF1Q14872 753 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 SAFBQ15424 915 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 CRY1Q16526 586 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 ZNF423Q2M1K9 1284 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 SLC23A3Q6PIS1 610 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 HDDC3Q8N4P3 179 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 FAM184AQ8NB25 1140 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 FBXO18Q8NFZ0 1043 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 ZCWPW1Q9H0M4 648 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 HSFX1Q9UBD0 423 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 MAGED2Q9UNF1 606 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 CITO14578 2027 aa14.88□□□□□ -0.03
SHKBP1-208ENST00000595726 NAV2Q8IVL1 2488 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 TTC26A0AVF1 554 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 LACTBL1A8MY62 500 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 HIP1RO75146 1068 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 HAPLN1P10915 354 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 TNFSF9P41273 254 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 IFNAR2P48551 515 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 LILRA4P59901 499 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 NOLC1Q14978 699 aaKnown RBP eCLIP14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 EML3Q32P44 896 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 SDHAF4Q5VUM1 108 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 MON1AQ86VX9 555 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 OSCP1Q8WVF1 389 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms