RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 NETO1Q8TDF5 533 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 LEO1Q8WVC0 666 aaPredicted RBP17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 GCNAQ96QF7 691 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 FAM213AQ9BRX8 229 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 FRMD3A2A2Y4 597 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 TADA3O75528 432 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 GAP43P17677 238 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 CASP5P51878 434 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 TAF12Q16514 161 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 NFE2Q16621 373 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 TXNDC8Q6A555 127 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 FAM160A2Q8N612 972 aaPredicted RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 CLIC6Q96NY7 704 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 ACCSQ96QU6 501 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 PI4K2AQ9BTU6 479 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 ABCB6Q9NP58 842 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 TDP1Q9NUW8 608 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 AGAP1Q9UPQ3 857 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 CNOT1A5YKK6 2376 aaKnown RBP17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 SDK1Q7Z5N4 2213 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 TSC2P49815 1807 aa17.12■□□□□ 0.33
GTF2F1-203ENST00000594213 CHD8Q9HCK8 2581 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CCDC163A0A0D9SF12 145 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 GABRDO14764 452 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CSH1P0DML2 217 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CSH2P0DML3 217 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 GARTP22102 1010 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 AVPR1AP37288 418 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 TFAMQ00059 246 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 TSPY1Q01534 308 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 SDHAF4Q5VUM1 108 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 RRAGBQ5VZM2 374 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 SV2BQ7L1I2 683 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 LIMS2Q7Z4I7 341 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 OSTM1Q86WC4 334 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 SAAL1Q96ER3 474 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 FAM84AQ96KN4 292 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CNTNAP3BQ96NU0 1288 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CNTNAP3Q9BZ76 1288 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 EBF3Q9H4W6 596 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 TBC1D7Q9P0N9 293 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 SIX4Q9UIU6 781 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
GTF2F1-203ENST00000594213 NOL4O94818 638 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 ITGB3P05106 788 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 ARSAP15289 507 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 CYP2F1P24903 491 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 RESTQ13127 1097 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 DDR2Q16832 855 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 INTS6LQ5JSJ4 861 aaKnown RBP17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 TMEM86AQ8N2M4 240 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 PCDHB13Q9Y5F0 798 aa17.1■□□□□ 0.33
GTF2F1-203ENST00000594213 A0A087X0B3 334 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 GDF9O60383 454 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 HUS1O60921 280 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 LDHAP00338 332 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 ADRB1P08588 477 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 CCDC142Q17RM4 750 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 CSGALNACT2Q8N6G5 542 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 CACTINQ8WUQ7 758 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 ITGA11Q9UKX5 1188 aa17.09■□□□□ 0.33
GTF2F1-203ENST00000594213 KMT2BQ9UMN6 2715 aaPredicted RBP17.08■□□□□ 0.33
GTF2F1-203ENST00000594213 ANK1P16157 1881 aa17.08■□□□□ 0.33
GTF2F1-203ENST00000594213 NUP210Q8TEM1 1887 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms