RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MBD3O95983 291 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 PDGFRBP09619 1106 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 ATF6P18850 670 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 GNL1P36915 607 aaPredicted RBP15.56■□□□□ 0.08
VRK3-206ENST00000594090 ASPAP45381 313 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 EPHB3P54753 998 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 EPHA5P54756 1037 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 CDH8P55286 799 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 DPCR1Q3MIW9 517 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 CBWD6Q4V339 395 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 CBWD3Q5JTY5 395 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 PRSS36Q5K4E3 855 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 CBWD5Q5RIA9 395 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 SPATA2LQ8IUW3 424 aaPredicted RBP15.56■□□□□ 0.08
VRK3-206ENST00000594090 FBXL13Q8NEE6 735 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 SEMA4DQ92854 862 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 SLC35C1Q96A29 364 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 APOBEC3GQ9HC16 384 aaKnown RBP15.56■□□□□ 0.08
VRK3-206ENST00000594090 ABCB6Q9NP58 842 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 CRTAC1Q9NQ79 661 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 ASAH2Q9NR71 780 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 LIMD1Q9UGP4 676 aa15.56■□□□□ 0.08
VRK3-206ENST00000594090 TTC28Q96AY4 2481 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 LRRN2O75325 713 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 ASGR2P07307 311 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 LAMP2P13473 410 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 NLRP12P59046 1061 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
VRK3-206ENST00000594090 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 PDZD4Q76G19 769 aaPredicted RBP15.55■□□□□ 0.08
VRK3-206ENST00000594090 TMC8Q8IU68 726 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 NPAS3Q8IXF0 933 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 HS6ST3Q8IZP7 471 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 CCDC150Q8NCX0 1101 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 FGF13Q92913 245 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 PSMG2Q969U7 264 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 MYLPFQ96A32 169 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 FUBP3Q96I24 572 aaKnown RBP eCLIP15.55■□□□□ 0.08
VRK3-206ENST00000594090 MED15Q96RN5 788 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 LPIN3Q9BQK8 851 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 SRRTQ9BXP5 876 aaKnown RBP15.55■□□□□ 0.08
VRK3-206ENST00000594090 BCO2Q9BYV7 579 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 DPEP3Q9H4B8 488 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 EPHX3Q9H6B9 360 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 RAB20Q9NX57 234 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 CDH7Q9ULB5 785 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 MRPS23Q9Y3D9 190 aaKnown RBP15.55■□□□□ 0.08
VRK3-206ENST00000594090 ASB3Q9Y575 518 aa15.55■□□□□ 0.08
VRK3-206ENST00000594090 ZFP37Q9Y6Q3 630 aaPredicted RBP15.55■□□□□ 0.08
VRK3-206ENST00000594090 PTPRDP23468 1912 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 A8MXQ7 604 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 FGFR1OPO95684 399 aaKnown RBP15.54■□□□□ 0.08
VRK3-206ENST00000594090 GNA14O95837 355 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 ALADP13716 330 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 CEBPBP17676 345 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 CYP2F1P24903 491 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 CCR2P41597 374 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 MARSP56192 900 aaKnown RBP15.54■□□□□ 0.08
VRK3-206ENST00000594090 VEPH1Q14D04 833 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 C4orf50Q6ZRC1 276 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 RBM43Q6ZSC3 357 aaKnown RBP15.54■□□□□ 0.08
VRK3-206ENST00000594090 ITIH5Q86UX2 942 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 B3GALNT2Q8NCR0 500 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 MYCBPAPQ8TBZ2 947 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 ING5Q8WYH8 240 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 TCEAL4Q96EI5 215 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 PCED1BQ96HM7 432 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 LRRC3Q9BY71 257 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 NIF3L1Q9GZT8 377 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 COQ4Q9Y3A0 265 aa15.54■□□□□ 0.08
VRK3-206ENST00000594090 NRG2O14511 850 aaPredicted RBP15.53■□□□□ 0.08
VRK3-206ENST00000594090 ZNF197O14709 1029 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 MICAL2O94851 1124 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 MYL4P12829 197 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 PTPN1P18031 435 aaKnown RBP15.53■□□□□ 0.08
VRK3-206ENST00000594090 GPR15P49685 360 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 CYP27A1Q02318 531 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 MDH1BQ5I0G3 518 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 CYP4A22Q5TCH4 519 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
VRK3-206ENST00000594090 TRIM59Q8IWR1 403 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 FAM200AQ8TCP9 573 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 GIPC2Q8TF65 315 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 ZNF334Q9HCZ1 680 aaPredicted RBP15.53■□□□□ 0.08
VRK3-206ENST00000594090 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
VRK3-206ENST00000594090 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 DACH1Q9UI36 760 aa15.53■□□□□ 0.08
VRK3-206ENST00000594090 MOSPD3O75425 235 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 MAGEA11P43364 429 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 FMO5P49326 533 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 NDST1P52848 882 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 RPL10AP62906 217 aaKnown RBP15.52■□□□□ 0.08
VRK3-206ENST00000594090 INCA1Q0VD86 236 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 HTR4Q13639 388 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 GPR152Q8TDT2 470 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 FAXDC2Q96IV6 333 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 TNIP3Q96KP6 325 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 KCNK12Q9HB15 430 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms