RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 VDRP11473 427 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 ITGB8P26012 769 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 GPC5P78333 572 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 SMC1AQ14683 1233 aaKnown RBP14.02□□□□□ -0.17
VRK3-205ENST00000593919 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
VRK3-205ENST00000593919 SGO2Q562F6 1265 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 DPH6Q7L8W6 267 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 HDXQ7Z353 690 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 ACOT1Q86TX2 421 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 UNC93AQ86WB7 457 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 ZNF280BQ86YH2 543 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 MCOLN2Q8IZK6 566 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 C12orf29Q8N999 325 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 C1orf131Q8NDD1 294 aaKnown RBP14.02□□□□□ -0.17
VRK3-205ENST00000593919 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 ZBTB9Q96C00 473 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 ZNF653Q96CK0 615 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 SENP8Q96LD8 212 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 PRDM5Q9NQX1 630 aaPredicted RBP14.02□□□□□ -0.17
VRK3-205ENST00000593919 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 CHORDC1Q9UHD1 332 aaPredicted RBP14.02□□□□□ -0.17
VRK3-205ENST00000593919 PCDHGC5Q9Y5F6 944 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 GRID2IPA4D2P6 1211 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 A8MXQ7 604 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 MAP2K7O14733 419 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 POLR3GO15318 223 aaPredicted RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 ZMYND10O75800 440 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 DDHD2O94830 711 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 LSM8O95777 96 aaKnown RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 CAPN2P17655 700 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 LMO2P25791 158 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 OAS2P29728 719 aaKnown RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 AARSP49588 968 aaKnown RBP eCLIP14.01□□□□□ -0.17
VRK3-205ENST00000593919 DSC1Q08554 894 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 C2CD6Q53TS8 623 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 MON1BQ7L1V2 547 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 CRIPAKQ8N1N5 446 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 HASPINQ8TF76 798 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 UROC1Q96N76 676 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 DPEP3Q9H4B8 488 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 GTF3C4Q9UKN8 822 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 PACSIN2Q9UNF0 486 aaPredicted RBP14.01□□□□□ -0.17
VRK3-205ENST00000593919 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.01□□□□□ -0.17
VRK3-205ENST00000593919 COG5Q9UP83 839 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 CEP83Q9Y592 693 aa14.01□□□□□ -0.17
VRK3-205ENST00000593919 TRIM43BA6NCK2 446 aa14□□□□□ -0.17
VRK3-205ENST00000593919 O00370 1275 aa14□□□□□ -0.17
VRK3-205ENST00000593919 PDGFRBP09619 1106 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CDH5P33151 784 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 PAFAH1B1P43034 410 aa14□□□□□ -0.17
VRK3-205ENST00000593919 GATMP50440 423 aa14□□□□□ -0.17
VRK3-205ENST00000593919 RNASELQ05823 741 aaKnown RBP14□□□□□ -0.17
VRK3-205ENST00000593919 TIGD5Q53EQ6 642 aa14□□□□□ -0.17
VRK3-205ENST00000593919 WSCD1Q658N2 575 aa14□□□□□ -0.17
VRK3-205ENST00000593919 DENND1BQ6P3S1 775 aa14□□□□□ -0.17
VRK3-205ENST00000593919 ZNF572Q7Z3I7 529 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 PHF13Q86YI8 300 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 RHOT2Q8IXI1 618 aa14□□□□□ -0.17
VRK3-205ENST00000593919 ABI1Q8IZP0 508 aa14□□□□□ -0.17
VRK3-205ENST00000593919 WDTC1Q8N5D0 677 aa14□□□□□ -0.17
VRK3-205ENST00000593919 TMEM35BQ8NCS4 154 aa14□□□□□ -0.17
VRK3-205ENST00000593919 TPCN2Q8NHX9 752 aa14□□□□□ -0.17
VRK3-205ENST00000593919 TRIM43Q96BQ3 446 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 MS4A14Q96JA4 679 aa14□□□□□ -0.17
VRK3-205ENST00000593919 C11orf70Q9BRQ4 267 aa14□□□□□ -0.17
VRK3-205ENST00000593919 SNX25Q9H3E2 840 aa14□□□□□ -0.17
VRK3-205ENST00000593919 GOLPH3Q9H4A6 298 aa14□□□□□ -0.17
VRK3-205ENST00000593919 PCDH10Q9P2E7 1040 aa14□□□□□ -0.17
VRK3-205ENST00000593919 KANSL3Q9P2N6 904 aa14□□□□□ -0.17
VRK3-205ENST00000593919 LRFN2Q9ULH4 789 aa14□□□□□ -0.17
VRK3-205ENST00000593919 STXBP5LQ9Y2K9 1186 aa14□□□□□ -0.17
VRK3-205ENST00000593919 TARSL2A2RTX5 802 aaKnown RBP14□□□□□ -0.17
VRK3-205ENST00000593919 F8W810 466 aa14□□□□□ -0.17
VRK3-205ENST00000593919 M0QYV0 167 aa14□□□□□ -0.17
VRK3-205ENST00000593919 MICAL2O94851 1124 aa14□□□□□ -0.17
VRK3-205ENST00000593919 KIF4AO95239 1232 aa14□□□□□ -0.17
VRK3-205ENST00000593919 TIMP1P01033 207 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CYP1A2P05177 515 aa14□□□□□ -0.17
VRK3-205ENST00000593919 ITGB1P05556 798 aa14□□□□□ -0.17
VRK3-205ENST00000593919 EN2P19622 333 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 WARSP23381 471 aaKnown RBP14□□□□□ -0.17
VRK3-205ENST00000593919 MCM3P25205 808 aa14□□□□□ -0.17
VRK3-205ENST00000593919 DMTNQ08495 405 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CNGA2Q16280 664 aa14□□□□□ -0.17
VRK3-205ENST00000593919 IFI16Q16666 785 aaKnown RBP14□□□□□ -0.17
VRK3-205ENST00000593919 PPP1R26Q5T8A7 1209 aaPredicted RBP14□□□□□ -0.17
VRK3-205ENST00000593919 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CNKSR3Q6P9H4 555 aa14□□□□□ -0.17
VRK3-205ENST00000593919 CD300LGQ6UXG3 332 aa14□□□□□ -0.17
VRK3-205ENST00000593919 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
VRK3-205ENST00000593919 OSTM1Q86WC4 334 aa14□□□□□ -0.17
VRK3-205ENST00000593919 COLGALT2Q8IYK4 626 aa14□□□□□ -0.17
VRK3-205ENST00000593919 SPATA4Q8NEY3 305 aa14□□□□□ -0.17
VRK3-205ENST00000593919 ZNF518BQ9C0D4 1074 aa14□□□□□ -0.17
VRK3-205ENST00000593919 LHX5Q9H2C1 402 aa14□□□□□ -0.17
VRK3-205ENST00000593919 FAM49BQ9NUQ9 324 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms