RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GIPC2Q8TF65 315 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 MRPL45Q9BRJ2 306 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 VRTNQ9H8Y1 702 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 ABCB6Q9NP58 842 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 RMND1Q9NWS8 449 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 IKBKBO14920 756 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 PHACTR2O75167 634 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 PDGFRBP09619 1106 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 CYP2F1P24903 491 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 GPR15P49685 360 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 MCCD1P59942 119 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 ADAM9Q13443 819 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 BIRC3Q13489 604 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 NCOA4Q13772 614 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 ZACNQ401N2 412 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 COBLL1Q53SF7 1204 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 SV2AQ7L0J3 742 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 ITIH5Q86UX2 942 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 SYAP1Q96A49 352 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 ELSPBP1Q96BH3 223 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 ELMO3Q96BJ8 720 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 SYT15Q9BQS2 421 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 MKNK1Q9BUB5 465 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 IL21Q9HBE4 155 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 CRTAC1Q9NQ79 661 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 CDH9Q9ULB4 789 aa19.79■□□□□ 0.76
SHKBP1-202ENST00000593764 SMC2O95347 1197 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 HMGA1P17096 107 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 RPL13P26373 211 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 GNL1P36915 607 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 VAMP7P51809 220 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 PSMC1P62191 440 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 VEPH1Q14D04 833 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 EDRF1Q3B7T1 1238 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 CFAP221Q4G0U5 840 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 STXBP5Q5T5C0 1151 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 CWF19L1Q69YN2 538 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 ASTLQ6HA08 431 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 TMEM105Q8N8V8 129 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 FAM200AQ8TCP9 573 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 SMARCD2Q92925 531 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 SMARCE1Q969G3 411 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 KCNH6Q9H252 994 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 MFSD1Q9H3U5 465 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 ZFP14Q9HCL3 533 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 CHMP5Q9NZZ3 219 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 NXF1Q9UBU9 619 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 CA14Q9ULX7 337 aa19.78■□□□□ 0.76
SHKBP1-202ENST00000593764 KMT2EQ8IZD2 1858 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 GABRR2P28476 465 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 CLCN5P51795 746 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 TNNC1P63316 161 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 DDR2Q16832 855 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 SDHAF4Q5VUM1 108 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 TMEM150AQ86TG1 271 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 FAM186BQ8IYM0 893 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 STKLD1Q8NE28 680 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 ZSCAN18Q8TBC5 510 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 EEF2KMTQ96G04 330 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 FUBP3Q96I24 572 aaKnown RBP eCLIP19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 GPR88Q9GZN0 384 aa19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 HOOK1Q9UJC3 728 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-202ENST00000593764 NCANO14594 1321 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 PI15O43692 258 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 FGF19O95750 216 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 PSMC2P35998 433 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 VIPR2P41587 438 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 PMS1P54277 932 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 CDH8P55286 799 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 ENPEPQ07075 957 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 PPP3CAQ08209 521 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 ZNF699Q32M78 642 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 INTS8Q75QN2 995 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 ADSSL1Q8N142 457 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 FLCNQ8NFG4 579 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 OR6B3Q8NGW1 331 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 SNX25Q9H3E2 840 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 ATXN3LQ9H3M9 355 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 SMYD3Q9H7B4 428 aa19.76■□□□□ 0.75
SHKBP1-202ENST00000593764 KINO60870 393 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 F11P03951 625 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 TRIM49P0CI25 452 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 TRIM49CP0CI26 452 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 MAGEA11P43364 429 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 RPL10AP62906 217 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 SGSM1Q2NKQ1 1148 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 ZNF667Q5HYK9 610 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 ANKRD40Q6AI12 368 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 VITQ6UXI7 678 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 C4orf50Q6ZRC1 276 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 ZC3H3Q8IXZ2 948 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 PRSS33Q8NF86 280 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 MYCBPAPQ8TBZ2 947 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 MYLPFQ96A32 169 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 RSPRY1Q96DX4 576 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 PCED1BQ96HM7 432 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 SDCBP2Q9H190 292 aa19.75■□□□□ 0.75
SHKBP1-202ENST00000593764 DPEP3Q9H4B8 488 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms