RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PACS2Q86VP3 889 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 FNIP1Q8TF40 1166 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 ACSF2Q96CM8 615 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 SYNCQ9H7C4 482 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 IFT122Q9HBG6 1241 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 ITGB3P05106 788 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 KRT7P08729 469 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 ATICP31939 592 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 RFC1P35251 1148 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 CDH8P55286 799 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 RBM15Q96T37 977 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■□□□□ 9.1
PRKCSH-217ENST00000592741 NSRP1Q9H0G5 558 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 SMYD3Q9H7B4 428 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 LGALS13Q9UHV8 139 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 CAPN7Q9Y6W3 813 aa17.47■□□□□ 0.39
PRKCSH-217ENST00000592741 A0A087WZ62 844 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 GOLGA6L7A0A1B0GV03 622 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 ITGAVP06756 1048 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 ABHD2P08910 425 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 P4HA1P13674 534 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 MAGEA4P43358 317 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 OASLQ15646 514 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 KYAT1Q16773 422 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 GTF3C2Q8WUA4 911 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 DYDC1Q8WWB3 177 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 HAUS1Q96CS2 278 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 C9orf72Q96LT7 481 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 FDXACB1Q9BRP7 624 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 ASB7Q9H672 318 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 CYP3A43Q9HB55 503 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 CTNNAL1Q9UBT7 734 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 TPX2Q9ULW0 747 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-217ENST00000592741 CDH16O75309 829 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 GH1P01241 217 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 GPS1Q13098 491 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 AMHR2Q16671 573 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 LRRC34Q8IZ02 419 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ANKS4BQ8N8V4 417 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 SLC4A11Q8NBS3 891 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 JOSD2Q8TAC2 188 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 P3H4Q92791 437 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 CFAP57Q96MR6 1250 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 TTC25Q96NG3 672 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ZWILCHQ9H900 591 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ACTR5Q9H9F9 607 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 SAYSD1Q9NPB0 183 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 PNMA3Q9UL41 463 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 EFR3BQ9Y2G0 817 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 EVPLQ92817 2033 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 TMEM120BA0PK00 339 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 H0YHG0 523 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 CILPO75339 1184 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ZSCAN5DPP0CG00 497 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 IFNAR2P48551 515 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ORC1Q13415 861 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 SNAPC2Q13487 334 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 MORF4L2Q15014 288 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 USP50Q70EL3 339 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 XYLT1Q86Y38 959 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 LINC01465Q8N7H1 131 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 TMEM176AQ96HP8 235 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 CPB2Q96IY4 423 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 CPXM1Q96SM3 734 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 PPP1R16BQ96T49 567 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 FRMD8P1Q9BZ68 369 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 VRTNQ9H8Y1 702 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 PCDH9Q9HC56 1237 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 METTL5Q9NRN9 209 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 SAMD15Q9P1V8 674 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 TJP2Q9UDY2 1190 aa17.45■□□□□ 0.38
PRKCSH-217ENST00000592741 C3orf70A6NLC5 250 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 LRCH4O75427 683 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 CSDE1O75534 798 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 MICAL2O94851 1124 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 ERBB2P04626 1255 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 COL1A2P08123 1366 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 VIMP08670 466 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 ETS1P14921 441 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 PLCB3Q01970 1234 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 ACTN3Q08043 901 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 VSTM1Q6UX27 236 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 RIBC1Q8N443 379 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 TWNKQ96RR1 684 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 ELOVL4Q9GZR5 314 aa17.44■□□□□ 0.38
PRKCSH-217ENST00000592741 VTA1Q9NP79 307 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms