RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 RSAD1Q9HA92 442 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PAK5Q9P286 719 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 F8VZ95 297 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 ADORA2AP29274 412 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CASP4P49662 377 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CUL3Q13618 768 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 GEMIN4P57678 1058 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 KDSRQ06136 332 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 EFTUD2Q15029 972 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■■■□ 25.9
DNMT1-228ENST00000592705 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 EXT2Q93063 718 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 EHD4Q9H223 541 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 KDM4CQ9H3R0 1056 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 VTA1Q9NP79 307 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 ZNF446Q9NWS9 450 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 L3MBTL1Q9Y468 752 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 IL1R1P14778 569 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 GTF2H1P32780 548 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 KIF2BQ8N4N8 673 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 SGPL1O95470 568 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 APRTP07741 180 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 FKBP1AP62942 108 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 KLC1Q07866 573 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 TMEM132DQ14C87 1099 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 ABTB1Q969K4 478 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 EMILIN2Q9BXX0 1053 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 MRPL46Q9H2W6 279 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 YY1AP1Q9H869 796 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 MANSC1Q9H8J5 431 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 MROH7Q68CQ1 1323 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 ARHGAP10A1A4S6 786 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 F5H423 210 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 AP3B1O00203 1094 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 ZC3H11AO75152 810 aaKnown RBP eCLIP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 SNRPAP09012 282 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 SCTRP47872 440 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 VGLL4Q14135 290 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 TTC39BQ5VTQ0 682 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 PID1Q7Z2X4 250 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 MAGEB18Q96M61 343 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 DEFB118Q96PH6 123 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 P2RX7Q99572 595 aaKnown RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
DNMT1-228ENST00000592705 FRMD8Q9BZ67 464 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 FRMD8P1Q9BZ68 369 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
DNMT1-228ENST00000592705 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 AKAP3O75969 853 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 GRK4P32298 578 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 ACTR2P61160 394 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 SV2CQ496J9 727 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TAF2Q6P1X5 1199 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 CCDC124Q96CT7 223 aaKnown RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 ZBTB18Q99592 522 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 ADAM33Q9BZ11 813 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 NMRK2Q9NPI5 230 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 ADA2Q9NZK5 511 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 AGAP1Q9UPQ3 857 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 CAND2O75155 1236 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 DSG3P32926 999 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 SLC26A2P50443 739 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 PRMT2P55345 433 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TMED1Q13445 227 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 DACT2Q5SW24 774 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 NIF3L1Q9GZT8 377 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 SNX9Q9Y5X1 595 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 O00370 1275 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 IL18RAPO95256 599 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 PTENP60484 403 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TMEM119Q4V9L6 283 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TMCO4Q5TGY1 634 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 IL17RBQ9NRM6 502 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 KANSL3Q9P2N6 904 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 CST8O60676 142 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 KLHL2O95198 593 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms