RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 DPH6Q7L8W6 267 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 CCDC34Q96HJ3 373 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 GCNAQ96QF7 691 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 PKMYT1Q99640 499 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 MRPL45Q9BRJ2 306 aaKnown RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
ERCC1-213ENST00000592023 COL4A2P08572 1712 aa16.28■□□□□ 0.2
ERCC1-213ENST00000592023 MYBPHLA2RUH7 354 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 ATP2C2O75185 946 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 FGF19O95750 216 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 WARSP23381 471 aaKnown RBP16.27■□□□□ 0.2
ERCC1-213ENST00000592023 PNOCQ13519 176 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 KCNB1Q14721 858 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 ARHGAP15Q53QZ3 475 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 GPR158Q5T848 1215 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 VITQ6UXI7 678 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 LIMS2Q7Z4I7 341 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 SPATA2LQ8IUW3 424 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-213ENST00000592023 FMR1NBQ8N0W7 255 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-213ENST00000592023 PARD3BQ8TEW8 1205 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 MYLPFQ96A32 169 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 FOXQ1Q9C009 403 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 GPR88Q9GZN0 384 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 IL21Q9HBE4 155 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 ABCB6Q9NP58 842 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 FAM86C1Q9NVL1 165 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 TRAF3IP3Q9Y228 551 aa16.27■□□□□ 0.2
ERCC1-213ENST00000592023 OBSL1O75147 1896 aa16.27■□□□□ 0.19
ERCC1-213ENST00000592023 TICRRQ7Z2Z1 1910 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 H0Y858 1186 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 NR2F2P24468 414 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 CYP2F1P24903 491 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 LMO2P25791 158 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 CDC25CP30307 473 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 NUBP1P53384 320 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 DLG4P78352 724 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 DDR2Q16832 855 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 PHLDB3Q6NSJ2 640 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 SCN4BQ8IWT1 228 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 CCDC105Q8IYK2 499 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 XYLT2Q9H1B5 865 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 SNX25Q9H3E2 840 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 CRTAC1Q9NQ79 661 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 MAGED2Q9UNF1 606 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-213ENST00000592023 FRMD4BQ9Y2L6 1034 aa16.26■□□□□ 0.19
ERCC1-213ENST00000592023 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 HEPACAM2A8MVW5 462 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 DCNP07585 359 aaKnown RBP16.25■□□□□ 0.19
ERCC1-213ENST00000592023 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 PSMC3P17980 439 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 GDI1P31150 447 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 AP3M2P53677 418 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
ERCC1-213ENST00000592023 PRKCQQ04759 706 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 FAM160A1Q05DH4 1040 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 CFAP221Q4G0U5 840 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 SCARA5Q6ZMJ2 495 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 C4orf50Q6ZRC1 276 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 TPRG1Q6ZUI0 275 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 OR6B3Q8NGW1 331 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 TMEM174Q8WUU8 243 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 DNASE1L2Q92874 299 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.19
ERCC1-213ENST00000592023 SHDQ96IW2 340 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 SMYD3Q9H7B4 428 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 TRPV4Q9HBA0 871 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
ERCC1-213ENST00000592023 PTPRDP23468 1912 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 LRRN2O75325 713 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 TACC1O75410 805 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 VNN1O95497 513 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 STAU1O95793 577 aaKnown RBP16.24■□□□□ 0.19
ERCC1-213ENST00000592023 C4BPAP04003 597 aaKnown RBP16.24■□□□□ 0.19
ERCC1-213ENST00000592023 CSH1P0DML2 217 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 CSH2P0DML3 217 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 HMGA1P17096 107 aaKnown RBP16.24■□□□□ 0.19
ERCC1-213ENST00000592023 ATICP31939 592 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 STARD6P59095 220 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 CLDN10P78369 228 aa16.24■□□□□ 0.19
ERCC1-213ENST00000592023 CYP27A1Q02318 531 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms