RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PTGISQ16647 500 aa20.81■□□□□ 0.92
MBD3-209ENST00000592012 SPOCD1Q6ZMY3 1216 aa20.81■□□□□ 0.92
MBD3-209ENST00000592012 ADPGKQ9BRR6 497 aa20.81■□□□□ 0.92
MBD3-209ENST00000592012 DPP3Q9NY33 737 aa20.81■□□□□ 0.92
MBD3-209ENST00000592012 ITGA11Q9UKX5 1188 aa20.81■□□□□ 0.92
MBD3-209ENST00000592012 ATF7P17544 494 aaPredicted RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 CCT5P48643 541 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 GSCP56915 257 aaPredicted RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 CAV1Q03135 178 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 XYLT1Q86Y38 959 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 ARFGAP1Q8N6T3 406 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 CCDC89Q8N998 374 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 JOSD2Q8TAC2 188 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 CDC42EP4Q9H3Q1 356 aaKnown RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 DOCK3Q8IZD9 2030 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 MICAL2O94851 1124 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 KLRC2P26717 231 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 PTPN7P35236 360 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 VPS41P49754 854 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 RBP5P82980 135 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 CNGA2Q16280 664 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 KIZQ2M2Z5 673 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 DRICH1Q6PGQ1 229 aaPredicted RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 NT5DC4Q86YG4 428 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 UHMK1Q8TAS1 419 aaKnown RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 FNIP1Q8TF40 1166 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 ACSF2Q96CM8 615 aaPredicted RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 TSPYL1Q9H0U9 437 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 DDX56Q9NY93 547 aaKnown RBP20.8■□□□□ 0.92
MBD3-209ENST00000592012 ANAPC5Q9UJX4 755 aa20.8■□□□□ 0.92
MBD3-209ENST00000592012 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.8■□□□□ 0.92
MBD3-209ENST00000592012 TLDC2A0PJX2 215 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 LIASO43766 372 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 STAU1O95793 577 aaKnown RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 ERBB2P04626 1255 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 PSMA2P25787 234 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 HOXA11P31270 313 aaPredicted RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 GRM5P41594 1212 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 GPD2P43304 727 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 TFDP3Q5H9I0 405 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 C6orf118Q5T5N4 469 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 POLNQ7Z5Q5 900 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 ADAMTS10Q9H324 1103 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 WDR35Q9P2L0 1181 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 DNPEPQ9ULA0 475 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 BARX2Q9UMQ3 279 aaPredicted RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 hCG_1818297A0A087WSY0 165 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 SRRM3A6NNA2 597 aaPredicted RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 HMGCRP04035 888 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 CDKN2BP42772 138 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 PPARDQ03181 441 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 INCA1Q0VD86 236 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 ZNF268Q14587 947 aaPredicted RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 CROCCP2Q86T23 111 aa20.79■□□□□ 0.92
MBD3-209ENST00000592012 HEXIM2Q96MH2 286 aaKnown RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 DDX23Q9BUQ8 820 aaKnown RBP20.79■□□□□ 0.92
MBD3-209ENST00000592012 RRN3P2A6NIE6 340 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 NDUFAB1O14561 156 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 LRCH4O75427 683 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 VDRP11473 427 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 GABRB2P47870 512 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 SLC25A11Q02978 314 aaKnown RBP20.78■□□□□ 0.92
MBD3-209ENST00000592012 LMNB2Q03252 620 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 SRLQ86TD4 932 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 KIF12Q96FN5 646 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 SYNCQ9H7C4 482 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 LRRD1A4D1F6 860 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 SLC15A5A6NIM6 579 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 C3orf70A6NLC5 250 aaPredicted RBP20.78■□□□□ 0.92
MBD3-209ENST00000592012 SEC24CP53992 1094 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 TMEM62Q0P6H9 643 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 PRUNE1Q86TP1 453 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 C2orf69Q8N8R5 385 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 CXCL16Q9H2A7 254 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 GINS2Q9Y248 185 aa20.78■□□□□ 0.92
MBD3-209ENST00000592012 A6NJR5 290 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 DYNC1LI2O43237 492 aaPredicted RBP20.77■□□□□ 0.92
MBD3-209ENST00000592012 IL1R2P27930 398 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 NDST1P52848 882 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 GSTA5Q7RTV2 222 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 EMC1Q8N766 993 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 BBOF1Q8ND07 529 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 EPS8L3Q8TE67 593 aaKnown RBP20.77■□□□□ 0.92
MBD3-209ENST00000592012 FAM124BQ9H5Z6 455 aaPredicted RBP20.77■□□□□ 0.92
MBD3-209ENST00000592012 SCN1AP35498 2009 aa20.77■□□□□ 0.92
MBD3-209ENST00000592012 SMIM23A6NLE4 172 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 M0QYV0 167 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 RGS16O15492 202 aaPredicted RBP20.77■□□□□ 0.91
MBD3-209ENST00000592012 GPR32O75388 356 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 DCAF4L1Q3SXM0 396 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 TNFAIP8L3Q5GJ75 292 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 PRAMEF19Q5SWL8 479 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 MCRS1Q96EZ8 462 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 FAM49AQ9H0Q0 323 aaPredicted RBP20.77■□□□□ 0.91
MBD3-209ENST00000592012 CDHR5Q9HBB8 845 aa20.77■□□□□ 0.91
MBD3-209ENST00000592012 METTL5Q9NRN9 209 aaKnown RBP20.77■□□□□ 0.91
MBD3-209ENST00000592012 DRG1Q9Y295 367 aaKnown RBP20.77■□□□□ 0.91
MBD3-209ENST00000592012 RRP15Q9Y3B9 282 aaKnown RBP20.77■□□□□ 0.91
MBD3-209ENST00000592012 EBAG9O00559 213 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms