RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 PARP9Q8IXQ6 854 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 BBOF1Q8ND07 529 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 SMYD3Q9H7B4 428 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 CYTH4Q9UIA0 394 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
CTDP1-207ENST00000591598 AGAP1Q9UPQ3 857 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-207ENST00000591598 CEP350Q5VT06 3117 aa17.66■□□□□ 0.42
CTDP1-207ENST00000591598 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ITGB3P05106 788 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 EFTUD2Q15029 972 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 TNFAIP8L3Q5GJ75 292 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ZPBP2Q6X784 338 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 CPB2Q96IY4 423 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 KDM4CQ9H3R0 1056 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 DNALI1O14645 258 aaPredicted RBP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 SUN1O94901 812 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 HOXC6P09630 235 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 SSTR1P30872 391 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ZNF667Q5HYK9 610 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 IER5Q5VY09 327 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ZC3H18Q86VM9 953 aaKnown RBP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ZCCHC9Q8N567 271 aaKnown RBP17.65■□□□□ 0.42
CTDP1-207ENST00000591598 CFAP57Q96MR6 1250 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 TWNKQ96RR1 684 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 CPXM1Q96SM3 734 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 TXNRD2Q9NNW7 524 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■■□ 21.7
CTDP1-207ENST00000591598 TRIM33Q9UPN9 1127 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ARID2Q68CP9 1835 aa17.65■□□□□ 0.42
CTDP1-207ENST00000591598 ZNF132P52740 706 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 MCCD1P59942 119 aaPredicted RBP17.64■□□□□ 0.42
CTDP1-207ENST00000591598 BASP1P80723 227 aaKnown RBP17.64■□□□□ 0.42
CTDP1-207ENST00000591598 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.42
CTDP1-207ENST00000591598 SPATA21Q7Z572 469 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 RFX6Q8HWS3 928 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 KIAA0319LQ8IZA0 1049 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 RSAD2Q8WXG1 361 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 C12orf65Q9H3J6 166 aaKnown RBP17.64■□□□□ 0.42
CTDP1-207ENST00000591598 RPF1Q9H9Y2 349 aaKnown RBP17.64■□□□□ 0.42
CTDP1-207ENST00000591598 SLCO1B3Q9NPD5 702 aa17.64■□□□□ 0.42
CTDP1-207ENST00000591598 CA4P22748 312 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ASPAP45381 313 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 STAT4Q14765 748 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 SNCBQ16143 134 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 Q3C1V9 767 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 BBS9Q3SYG4 887 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ANKRD22Q5VYY1 191 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ARHGEF18Q6ZSZ5 1173 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ALLCQ8N6M5 410 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 KCTD6Q8NC69 237 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 SGSM3Q96HU1 749 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 CPSF3Q9UKF6 684 aaKnown RBP17.64■□□□□ 0.41
CTDP1-207ENST00000591598 IGKV6D-21A0A0A0MT36 114 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 FAM189A1O60320 539 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ITGBL1O95965 494 aaPredicted RBP17.64■□□□□ 0.41
CTDP1-207ENST00000591598 IQCF3P0C7M6 154 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 TXNP10599 105 aaKnown RBP17.64■□□□□ 0.41
CTDP1-207ENST00000591598 CDKN2BP42772 138 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 VCPP55072 806 aaKnown RBP17.64■□□□□ 0.41
CTDP1-207ENST00000591598 LMNB2Q03252 620 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 SH3PXD2AQ5TCZ1 1133 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 FAM71DQ8N9W8 422 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 RMDN2Q96LZ7 410 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 GPR20Q99678 358 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
CTDP1-207ENST00000591598 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
CTDP1-207ENST00000591598 RLFQ13129 1914 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 A0A1W2PPM1 405 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 M0QYV0 167 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 KCNJ2P63252 427 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 PIGHQ14442 188 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 RAB6CQ53S08 254 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 MPZL3Q6UWV2 235 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 RIOX2Q8IUF8 465 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 HEXIM2Q96MH2 286 aaKnown RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 RAB6CQ9H0N0 254 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 ASCC2Q9H1I8 757 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 TRABDQ9H4I3 376 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 LRCH4O75427 683 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 FOXN2P32314 431 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 MXD4Q14582 209 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 ITIH4Q14624 930 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 SCYL2Q6P3W7 929 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 SUGP1Q8IWZ8 645 aaKnown RBP17.63■□□□□ 0.41
CTDP1-207ENST00000591598 CKAP2Q8WWK9 683 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 XYLT2Q9H1B5 865 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 RNPEPQ9H4A4 650 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 CNTN6Q9UQ52 1028 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 AKT3Q9Y243 479 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 EVPLQ92817 2033 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 DOCK1Q14185 1865 aa17.63■□□□□ 0.41
CTDP1-207ENST00000591598 VTNP04004 478 aa17.62■□□□□ 0.41
CTDP1-207ENST00000591598 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
CTDP1-207ENST00000591598 PLCB4Q15147 1175 aa17.62■□□□□ 0.41
CTDP1-207ENST00000591598 CCDC33Q8N5R6 958 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms