RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IQSEC1Q6DN90 963 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 SETD3Q86TU7 594 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 TBC1D19Q8N5T2 526 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 NSMCE4AQ9NXX6 385 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 MYPNQ86TC9 1320 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 HNRNPRO43390 633 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 ADCY3O60266 1144 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 DEAF1O75398 565 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 CDR2LQ86X02 465 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 ATP8B4Q8TF62 1192 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 RAPGEF5Q92565 580 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 TSPAN17Q96FV3 270 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 C3orf70A6NLC5 250 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 TMEM253P0C7T8 217 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 HADHAP40939 763 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ARL4DP49703 201 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 GALCP54803 685 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 P3H1Q32P28 736 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 CTXN3Q4LDR2 81 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 DAB2IPQ5VWQ8 1189 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 LZICQ8WZA0 190 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 RBM15Q96T37 977 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■□ 21.5
SMARCA4-216ENST00000591545 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC24A3Q9HC58 644 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 VTNP04004 478 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC11A2P49281 568 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 CENPCQ03188 943 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 CNGA3Q16281 694 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 TRAPPC11Q7Z392 1133 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC35G2Q8TBE7 412 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 BLOC1S6Q9UL45 172 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 H0Y626 953 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 TRIM16O95361 564 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PTPRAP18433 802 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 STX3Q13277 289 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ATP6V0D2Q8N8Y2 350 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PPHLN1Q8NEY8 458 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC7A14Q8TBB6 771 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ISCUQ9H1K1 167 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 BTG3Q14201 252 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ARHGEF26Q96DR7 871 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 PAWRQ96IZ0 340 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 CCDC134Q9H6E4 229 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 SETD4Q9NVD3 440 aa13.89□□□□□ -0.19
SMARCA4-216ENST00000591545 ANGPT2O15123 496 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 WEE2P0C1S8 567 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 UCHL3P15374 230 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 FMR1Q06787 632 aaKnown RBP eCLIP13.88□□□□□ -0.195e-7■■■□□ 18.2
SMARCA4-216ENST00000591545 STK4Q13043 487 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 GRIK4Q16099 956 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 SEC16BQ96JE7 1060 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 CHP1Q99653 195 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 IPPQ9Y573 584 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 LSP1P33241 339 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 ALDH5A1P51649 535 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 MFSD10Q14728 455 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 TRPM8Q7Z2W7 1104 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 EPHB3P54753 998 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 PTK2BQ14289 1009 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 OTUB1Q96FW1 271 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 CKMP06732 381 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF286BP0CG31 522 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 INSRRP14616 1297 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 PGM5Q15124 567 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 C15orf52Q6ZUT6 534 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF677Q86XU0 584 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 FOPNLQ96NB1 174 aa13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 AGO4Q9HCK5 861 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-216ENST00000591545 FAM107AO95990 144 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 KCNA2P16389 499 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms