RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 GIT1Q9Y2X7 761 aa20.62■□□□□ 0.89
SPHK1-207ENST00000590959 SNX9Q9Y5X1 595 aa20.62■□□□□ 0.89
SPHK1-207ENST00000590959 PTGESO14684 152 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 PPEF2O14830 753 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 MED7O43513 233 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 MGEA5O60502 916 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 LSM8O95777 96 aaKnown RBP20.61■□□□□ 0.89
SPHK1-207ENST00000590959 CFHP08603 1231 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 SKOR1P84550 965 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 SLFN11Q7Z7L1 901 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 PASD1Q8IV76 773 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 C10orf67Q8IYJ2 551 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 MCOLN2Q8IZK6 566 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 WHAMMQ8TF30 809 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 VWCEQ96DN2 955 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 TMEM176AQ96HP8 235 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 PPP1R10Q96QC0 940 aaKnown RBP20.61■□□□□ 0.89
SPHK1-207ENST00000590959 RPS6KC1Q96S38 1066 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 PCDHGC3Q9UN70 934 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 COG5Q9UP83 839 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 TRIP11Q15643 1979 aa20.61■□□□□ 0.89
SPHK1-207ENST00000590959 A0A0U1RQF3 1178 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 MEIS3P2A8K0S8 358 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 NCK2O43639 380 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 SKIP12755 728 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 CD19P15391 556 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 MLH1P40692 756 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 SOX4Q06945 474 aaPredicted RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 SPATS2Q86XZ4 545 aaKnown RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 MREGQ8N565 214 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 TFAP2BQ92481 460 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 GAD1Q99259 594 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ADAM2Q99965 735 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ZSWIM1Q9BR11 485 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 LRRC1Q9BTT6 524 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 UVRAGQ9P2Y5 699 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 RSPH14Q9UHP6 348 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 CEP83Q9Y592 693 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ATXN2Q99700 1313 aaKnown RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ATMINO43313 823 aaPredicted RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 BUB1BO60566 1050 aaPredicted RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 MTA2O94776 668 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 MYBL2P10244 700 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 LRPAP1P30533 357 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 TCTN1Q2MV58 587 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 PEX26Q7Z412 305 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 C7orf61Q8IZ16 206 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 SLC4A11Q8NBS3 891 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 LPPQ93052 612 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 VCPIP1Q96JH7 1222 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 TWNKQ96RR1 684 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ZNF518BQ9C0D4 1074 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 ELOVL4Q9GZR5 314 aa20.6■□□□□ 0.89
SPHK1-207ENST00000590959 CNOT8Q9UFF9 292 aaKnown RBP20.6■□□□□ 0.89
SPHK1-207ENST00000590959 TANC1Q9C0D5 1861 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 KIAA0355O15063 1070 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 CPP00450 1065 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 SSTR3P32745 418 aaPredicted RBP20.59■□□□□ 0.89
SPHK1-207ENST00000590959 AGMOQ6ZNB7 445 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 MON1BQ7L1V2 547 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 PHF13Q86YI8 300 aaPredicted RBP20.59■□□□□ 0.89
SPHK1-207ENST00000590959 TMEM35BQ8NCS4 154 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 GSTCDQ8NEC7 633 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 NUP85Q9BW27 656 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 NT5C1AQ9BXI3 368 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 CAPS2Q9BXY5 557 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 GOLPH3Q9H4A6 298 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 GOLGA2P5Q9HBQ8 144 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 AVENQ9NQS1 362 aaPredicted RBP20.59■□□□□ 0.89
SPHK1-207ENST00000590959 GDF3Q9NR23 364 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 HMGXB4Q9UGU5 601 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 LCMT1Q9UIC8 334 aa20.59■□□□□ 0.89
SPHK1-207ENST00000590959 PDCD11Q14690 1871 aaKnown RBP20.59■□□□□ 0.89
SPHK1-207ENST00000590959 ARL5CA6NH57 179 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 KPNA7A9QM74 516 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 TIMP1P01033 207 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 THP07101 528 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 TAF6P49848 677 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 NDST1P52848 882 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 RPS6KA1Q15418 735 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 SV2CQ496J9 727 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 ZNF564Q8TBZ8 553 aaPredicted RBP20.58■□□□□ 0.89
SPHK1-207ENST00000590959 PGBD4Q96DM1 585 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 GDAP2Q9NXN4 497 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 ADAM22Q9P0K1 906 aa20.58■□□□□ 0.89
SPHK1-207ENST00000590959 A0A087WUV0 522 aaPredicted RBP20.58■□□□□ 0.88
SPHK1-207ENST00000590959 SRRM3A6NNA2 597 aaPredicted RBP20.58■□□□□ 0.88
SPHK1-207ENST00000590959 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.88
SPHK1-207ENST00000590959 LIN9Q5TKA1 542 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 DEFB128Q7Z7B8 93 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 LHX5Q9H2C1 402 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 UBN1Q9NPG3 1134 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 AMFRQ9UKV5 643 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 KIAA1257Q9ULG3 409 aa20.58■□□□□ 0.88
SPHK1-207ENST00000590959 PACSIN2Q9UNF0 486 aaPredicted RBP20.58■□□□□ 0.88
SPHK1-207ENST00000590959 EBAG9O00559 213 aa20.57■□□□□ 0.88
SPHK1-207ENST00000590959 VDRP11473 427 aa20.57■□□□□ 0.88
SPHK1-207ENST00000590959 RAG1P15918 1043 aa20.57■□□□□ 0.88
SPHK1-207ENST00000590959 SYN1P17600 705 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms