RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 OTUD5Q96G74 571 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 AVENQ9NQS1 362 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 SNX9Q9Y5X1 595 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 HUS1O60921 280 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 CA8P35219 290 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 MYL6P60660 151 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 SPIRE2Q8WWL2 714 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 ZFATQ9P243 1243 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 H3BRJ5 948 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 DNALI1O14645 258 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 RBP5P82980 135 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 MTDHQ86UE4 582 aaKnown RBP17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 ARMC2Q8NEN0 867 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 PRPF31Q8WWY3 499 aaKnown RBP17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
SMARCA4-215ENST00000590574 IL18RAPO95256 599 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 PECAM1P16284 738 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 RAP1GAPP47736 663 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 KPNA2P52292 529 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 GTF2BQ00403 316 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 CHI3L2Q15782 390 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 HSP90AA5PQ58FG0 334 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 SAMD7Q7Z3H4 446 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 DDX27Q96GQ7 796 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 TRIM56Q9BRZ2 755 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 CISHQ9NSE2 258 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 DNPEPQ9ULA0 475 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 CHKAP35790 457 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 PGBD4Q96DM1 585 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 THTPAQ9BU02 230 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 DCDC2CA8MYV0 355 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 ITGB3P05106 788 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 KLC1Q07866 573 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 CUL3Q13618 768 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 TEX9Q8N6V9 391 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 E2F7Q96AV8 911 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 FAM49BQ9NUQ9 324 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 L3MBTL1Q9Y468 752 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 VCPP55072 806 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 MROH9Q5TGP6 573 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 SLC51AQ86UW1 340 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 COG5Q9UP83 839 aa17.91■□□□□ 0.46
SMARCA4-215ENST00000590574 MFSD7Q6UXD7 560 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 PID1Q7Z2X4 250 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 YY1AP1Q9H869 796 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 SLC24A2Q9UI40 661 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 OGTO15294 1046 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 MAP3K6O95382 1288 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 PKN2Q16513 984 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 TMEM154Q6P9G4 183 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 ACAD11Q709F0 780 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 EMC1Q8N766 993 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 STAP1Q9ULZ2 295 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 OPLAHO14841 1288 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 SNX3O60493 162 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 EFHC2Q5JST6 749 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 SAMD3Q8N6K7 520 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 LRRC19Q9H756 370 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 BFARQ9NZS9 450 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 EFCAB12Q6NXP0 572 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 PRPF39Q86UA1 669 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 NDUFAF2Q8N183 169 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 ZNF518BQ9C0D4 1074 aa17.9■□□□□ 0.46
SMARCA4-215ENST00000590574 LSM8O95777 96 aaKnown RBP17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 FKBP1AP62942 108 aaKnown RBP17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 KCNV1Q6PIU1 500 aa17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 ACTL9Q8TC94 416 aa17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 PCDHB18PQ96TA0 734 aa17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 FRMD8P1Q9BZ68 369 aaPredicted RBP17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 TRIM33Q9UPN9 1127 aa17.89■□□□□ 0.46
SMARCA4-215ENST00000590574 STIP1P31948 543 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 SERPINB9P50453 376 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 DNAL1Q4LDG9 190 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 ANGEL2Q5VTE6 544 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 DAB2IPQ5VWQ8 1189 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 DSTYKQ6XUX3 929 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 METTL23Q86XA0 190 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 ARID3BQ8IVW6 561 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 SHC3Q92529 594 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 NT5C1AQ9BXI3 368 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 PCDH9Q9HC56 1237 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 E2F8A0AVK6 867 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 ZSCAN5DPP0CG00 497 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 ALDH5A1P51649 535 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 KYAT1Q16773 422 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 PALB2Q86YC2 1186 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 PWWP2AQ96N64 755 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 TMEM237Q96Q45 408 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 CCDC68Q9H2F9 335 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 SMARCAD1Q9H4L7 1026 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 ATXN2Q99700 1313 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms