RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TBX2Q13207 712 aaPredicted RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 RAPGEF1Q13905 1077 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 KCNC3Q14003 757 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 TRIM14Q14142 442 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 GSE1Q14687 1217 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 DUSP6Q16828 381 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 TMEM270Q6UE05 265 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 PPFIBP1Q86W92 1011 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 RBBP8NLQ8NC74 664 aaPredicted RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 NSUN3Q9H649 340 aaKnown RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 GTF3C4Q9UKN8 822 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
APOC1-206ENST00000590334 VNN2O95498 520 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 OR4Q2P0C623 313 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CPB1P15086 417 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 ATF2P15336 505 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 KLRC2P26717 231 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CDC25BP30305 580 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CA8P35219 290 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CLCN1P35523 988 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 PSMC1P62191 440 aaKnown RBP12.83□□□□□ -0.36
APOC1-206ENST00000590334 NFE2Q16621 373 aaPredicted RBP12.83□□□□□ -0.36
APOC1-206ENST00000590334 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 Q7L0L9 218 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 CACNA2D4Q7Z3S7 1137 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 DEFB123Q8N688 67 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 PPP2R3CQ969Q6 453 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 FUBP3Q96I24 572 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOC1-206ENST00000590334 FAM161BQ96MY7 647 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 GAS2L1Q99501 681 aaPredicted RBP12.83□□□□□ -0.36
APOC1-206ENST00000590334 TLE6Q9H808 572 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
APOC1-206ENST00000590334 AFF4Q9UHB7 1163 aaKnown RBP12.83□□□□□ -0.36
APOC1-206ENST00000590334 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 TGM5O43548 720 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 CSPG5O95196 566 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ADCY5O95622 1261 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 VDRP11473 427 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 KRT5P13647 590 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 SOX5P35711 763 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 STAT1P42224 750 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 MRE11P49959 708 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 BPIFB4P59827 614 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ZBED6P86452 979 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 HYAL1Q12794 435 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ORC1Q13415 861 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ARHGAP17Q68EM7 881 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 PAQR9Q6ZVX9 377 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 PALB2Q86YC2 1186 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 GLYCTKQ8IVS8 523 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 C12orf29Q8N999 325 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 CDX2Q99626 313 aaPredicted RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
APOC1-206ENST00000590334 MTMR10Q9NXD2 777 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 AIPL1Q9NZN9 384 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 FBXW11Q9UKB1 542 aa12.82□□□□□ -0.36
APOC1-206ENST00000590334 MYO9BQ13459 2157 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 OBSL1O75147 1896 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 PER2O15055 1255 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 CYP26A1O43174 497 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 PAPLNO95428 1278 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 GLUD1P00367 558 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 MAGEA11P43364 429 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 NRIP1P48552 1158 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 ARPP19P56211 112 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 PTK2Q05397 1052 aa12.81□□□□□ -0.36
APOC1-206ENST00000590334 STILQ15468 1287 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms