RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TMEM161BQ8NDZ6 487 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 OXCT2Q9BYC2 517 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 ZCWPW1Q9H0M4 648 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 ECT2Q9H8V3 914 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 TDP1Q9NUW8 608 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 UBQLN1Q9UMX0 589 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 MSRB2Q9Y3D2 182 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 WNT6Q9Y6F9 365 aa13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 ATXN2Q99700 1313 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-210ENST00000589990 FAM189A1O60320 539 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 MAPTP10636 758 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 PTGER3P43115 390 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 VEPH1Q14D04 833 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 C2orf27AQ580R0 203 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 CCDC33Q8N5R6 958 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 MDGA1Q8NFP4 955 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 SNX29Q8TEQ0 813 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 CD101Q93033 1021 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 GCNAQ96QF7 691 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 TMLHEQ9NVH6 421 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 LRWD1Q9UFC0 647 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 PI4KAP42356 2102 aa13.84□□□□□ -0.19
PRKCSH-210ENST00000589990 MYH11P35749 1972 aa13.83□□□□□ -0.19
PRKCSH-210ENST00000589990 CLDN3O15551 220 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 NFICP08651 508 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 CLTAP09496 248 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 ODC1P11926 461 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 CYP3A5P20815 502 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MUTP22033 750 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 TUFMP49411 452 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 SIM1P81133 766 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MESP2Q0VG99 397 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MTF1Q14872 753 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 TAF12Q16514 161 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 CCDC142Q17RM4 750 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 PIP4P1Q86T03 277 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 RASSF3Q86WH2 238 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 ASH1LQ9NR48 2969 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MBD1Q9UIS9 605 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-210ENST00000589990 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 K7EQS6 105 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 ENGP17813 658 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 PPP2R3AQ06190 1150 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 STRN3Q13033 797 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 PDGFRLQ15198 375 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 ZNF77Q15935 545 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 IL17AQ16552 155 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 EML3Q32P44 896 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 ZC2HC1CQ53FD0 456 aaPredicted RBP13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 SPATA1Q5VX52 437 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 C9orf57Q5W0N0 161 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 CC2D1AQ6P1N0 951 aaPredicted RBP13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 MON1AQ86VX9 555 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 PROSER1Q86XN7 944 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 TMEFF1Q8IYR6 380 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 OR2I1PQ8NGU4 316 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 COL26A1Q96A83 441 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 ACDQ96AP0 544 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 ZDHHC4Q9NPG8 344 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 DUS2Q9NX74 493 aaKnown RBP13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 GPSM3Q9Y4H4 160 aa13.82□□□□□ -0.2
PRKCSH-210ENST00000589990 PIRO00625 290 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 CYP11A1P05108 521 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 OPRD1P41143 372 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 TRIM29Q14134 588 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 GAB4Q2WGN9 574 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms