RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SEPT5	Q99719	369 aa	Predicted RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SYT15	Q9BQS2	421 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	PI4K2A	Q9BTU6	479 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	DPEP3	Q9H4B8	488 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	IL21	Q9HBE4	155 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	APOBEC3G	Q9HC16	384 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	NXF1	Q9UBU9	619 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	NUMBL	Q9Y6R0	609 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	NCAN	O14594	1321 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	TMEM221	A6NGB7	291 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	PRR33	A8MZF0	331 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867		M0R296	226 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	PHACTR2	O75167	634 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MICAL2	O94851	1124 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	PDGFB	P01127	241 aa	Predicted RBP	18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	HMGA1	P17096	107 aa	Known RBP	18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	FCAR	P24071	287 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	CYP2F1	P24903	491 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	RAP1GAP	P47736	663 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	ALDH1A3	P47895	512 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	TDG	Q13569	410 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MTMR3	Q13615	1198 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	ZNF699	Q32M78	642 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MGAT5B	Q3V5L5	792 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	SDHAF4	Q5VUM1	108 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	GPR152	Q8TDT2	470 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	SEMA4D	Q92854	862 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MCRS1	Q96EZ8	462 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	IPO9	Q96P70	1041 aa	Known RBP	18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MED15	Q96RN5	788 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	TMEM30A	Q9NV96	361 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	KIAA1468	Q9P260	1216 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	RAPGEFL1	Q9UHV5	662 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	CDH9	Q9ULB4	789 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	DUSP12	Q9UNI6	340 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	PCDHB5	Q9Y5E4	795 aa		18.52	■□□□□ 0.56
MBD1-221	ENST00000589867	MUC6	Q6W4X9	2439 aa		18.52	■□□□□ 0.55
MBD1-221	ENST00000589867	WDFY4	Q6ZS81	3184 aa		18.52	■□□□□ 0.55
MBD1-221	ENST00000589867	OBSL1	O75147	1896 aa		18.52	■□□□□ 0.55
MBD1-221	ENST00000589867	CETN3	O15182	167 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	MYL4	P12829	197 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	PCSK1	P29120	753 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	GNL1	P36915	607 aa	Predicted RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	ASPA	P45381	313 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	TUFM	P49411	452 aa	Known RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	EPHB3	P54753	998 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	FKBP3	Q00688	224 aa	Known RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	LRRC63	Q05C16	580 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	PLD1	Q13393	1074 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	NFE2	Q16621	373 aa	Predicted RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	IQCE	Q6IPM2	695 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	PDZD4	Q76G19	769 aa	Predicted RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	BMP8A	Q7Z5Y6	402 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	TMEM150A	Q86TG1	271 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	UBALD2	Q8IYN6	164 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	GIPC2	Q8TF65	315 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	MYLPF	Q96A32	169 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	GTPBP4	Q9BZE4	634 aa	Known RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	PLA2G2F	Q9BZM2	168 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	ABCB6	Q9NP58	842 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	ASAH2	Q9NR71	780 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	GDE1	Q9NZC3	331 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	ASB3	Q9Y575	518 aa		18.51	■□□□□ 0.55
MBD1-221	ENST00000589867	TNNC1	P63316	161 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	TEAD2	Q15562	447 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	DDR2	Q16832	855 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	SGSM1	Q2NKQ1	1148 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	CFAP221	Q4G0U5	840 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	ZNF667	Q5HYK9	610 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	STXBP5	Q5T5C0	1151 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	IER5L	Q5T953	404 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	KLHL10	Q6JEL2	608 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	FOXR2	Q6PJQ5	311 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	SCARA5	Q6ZMJ2	495 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	ELMOD1	Q8N336	334 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	NELFB	Q8WX92	580 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	NXPE3	Q969Y0	559 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	PCED1B	Q96HM7	432 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	CLSTN2	Q9H4D0	955 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	TMEM8A	Q9HCN3	771 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.5	■□□□□ 0.55	2e-6	■■■■■ 96.1
MBD1-221	ENST00000589867	HMGXB4	Q9UGU5	601 aa		18.5	■□□□□ 0.55
MBD1-221	ENST00000589867		A0A1W2PRU2	124 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	ZNF197	O14709	1029 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	PSMA7	O14818	248 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	SLC16A3	O15427	465 aa	Known RBP	18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	EPB41	P11171	864 aa	Known RBP	18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	KRT13	P13646	458 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	GTF2H1	P32780	548 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	CACNA2D1	P54289	1103 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	CBWD6	Q4V339	395 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	CBWD3	Q5JTY5	395 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	FAM78A	Q5JUQ0	283 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	CBWD5	Q5RIA9	395 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	CYP4A22	Q5TCH4	519 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	TANGO2	Q6ICL3	276 aa		18.49	■□□□□ 0.55
MBD1-221	ENST00000589867	LEMD2	Q8NC56	503 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms